Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1696 ATGGGTGAGAGAACCGTGTCTGGCTCCGCCATCAAGGTTGTTTCTAAAAAGTCCTTGTGCTGTTTCTTCACAATGACAACGTTGCTGTTCATGTTGTCATGGTTGTTCGTTCTGCGCTCCACGCGCTCCGAGGCCTCGCCTCGTTCCACTAACAACAATCCAAACCTTTTCTCTTTCGGTTCTGATCCAGTGCAGCACAAGAACAACGCGGAAGTGGAACCCTCCTTTGGCAACAGAGCAATACTCGTGGACAGCATAGAAGCAACACGTGACGAGAAACATGTGCCTGAAGAAGAACCTGTGAAGTGCAACAACACACGTGCCAATATTGTTCTGAGAGTTTTCATGTATGATTTGCCTCCTGAGTTCCATTTTGGACTGCTGGATTGGAAACCCGAGGAGAATGTTAACAGTGTTTGGCCTGATATCAGAAATAAAGCACCCCATCACCCTGGAGGGTTGAATTTGCAGCATAGTATAGAGTATTGGCTTACTTTGGATCTTCTTGATTCAGAACTACCTGAAGCGGCATCTAGTGCTAGGAGTGTAATCAGGGTTAGAAACTCTACAGAAGCTGATGTAATATTTGTGccattcttttcttctctttgttaTAACCGTTTCTCCAAAACTGACCCACATGAGAAGAGGAGCAGGAACAAGGTGCTGCAAGAGAAGTTGGTGAAGTATGTGACAGCTCAAGAGGAATGGAAGAGGTCAGGGGGGAGGGACCATGTGATTTTGGCTCACCATCCAAATAGTATGTTGGATGCTAGAATGAAGTTATGGCCTGGCACTTTCATACTCTCAGATTTTGGGAGGTATCCCCCCAACATAGCCAATGTTGAGAAAGATGTGATTGCACCTTACAAACATGTAGTTCGATCCTATGATAATGATCAGTCCAGCTTTGATAGCCGTCCAACATTGCTCTACTTCCAAGGAGCAATATATAGAAAAGATGGAGGTCATGTTCGGCATGAGCTAttctatcttttaaaaaacGAGAAGGATGTGCATTTTTCATTTGGGAGTGTTCAAAAGGGTGGAGTGAGAAAGGCCACGGAAGGCATGCGTTCTTCCAAGTTCTGCCTCAACATAGCCGGGGACACCCCTTCATCGAACCGCTTGTTTGATGCCATTGCCAGTCACTGCGTCCCCGTCATCATCAGCGACGAAATCGAGCTGCCATACGAGGATGTCCTAGACTACTCTCAGTTCTGCGTGTTTGTGCGCACAAGAGATGCTCTCAAAAAGAGGTTTCTGATAGACTTCATTAGGGGCATTGGGAAGGAAGACTGGACCAGGATGCGGAACAGGTTGCAAGAGGTCCAGAGTTTCTTTGAGTTTCAGTTCCCATCCAAGGAGGGTGATGCTGTCCAAATGATTTGGCAGGCCGTTGCACGCAAGGTTCCTTTTATGAAACTGAAAAATAATAGATCTAGAAGGTTTCTCCGGTCTCTTTATGGGAAAGAGATGGGGCACAAAACAATACCTGCACCGGGTAATTTATggtga 1518 0.4506 MGERTVSGSAIKVVSKKSLCCFFTMTTLLFMLSWLFVLRSTRSEASPRSTNNNPNLFSFGSDPVQHKNNAEVEPSFGNRAILVDSIEATRDEKHVPEEEPVKCNNTRANIVLRVFMYDLPPEFHFGLLDWKPEENVNSVWPDIRNKAPHHPGGLNLQHSIEYWLTLDLLDSELPEAASSARSVIRVRNSTEADVIFVPFFSSLCYNRFSKTDPHEKRSRNKVLQEKLVKYVTAQEEWKRSGGRDHVILAHHPNSMLDARMKLWPGTFILSDFGRYPPNIANVEKDVIAPYKHVVRSYDNDQSSFDSRPTLLYFQGAIYRKDGGHVRHELFYLLKNEKDVHFSFGSVQKGGVRKATEGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSQFCVFVRTRDALKKRFLIDFIRGIGKEDWTRMRNRLQEVQSFFEFQFPSKEGDAVQMIWQAVARKVPFMKLKNNRSRRFLRSLYGKEMGHKTIPAPGNLW 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1696 505 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 8 487 IPR004263 GO:0006486|GO:0016757
Ssu4g1696 505 PANTHER EXOSTOSIN FAMILY PROTEIN 8 487 - -
Ssu4g1696 505 Pfam Exostosin family 112 422 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1696 Ssu-Chr4 29847432 29850252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1696 - K22846 gmx:100816974 857.825