Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1695 ATGAGAATGGCGCTATCTTCGTCATCGTGTGGGTGTTTTTCCTCTACACCGCTTCCCTTTCATCTCACTCGGCTTCATCGGCACCCTATTGTTAGCCTCAAACCCTATACTCGTTCTCAGGCTCAGCACACCCTCGCGGCCGCCGCGACACCTTCTACTCCGCCACTCTACTCCACCCGACAAGGGTTCGACACCGTCAACATTGCCGAAGATGTCACCCAGTTGATTGGAAATACGCCAATGGTGTACCTCAATAAAGTTACGGAAGGTTGTGTGGCTAACATTGCTGCGAAACTTGAGTCTATGGAACCTTGCCGAAGTGTCAAGGACAGAATTGGCTACAGTATGTTATCTGATGCTGAAGAGATTGGAGCAATTTCTCCGGGGAAGACCATTTTGGTTGAACCAACGACTGGAAATACAGGACTTGGCATTGCTTTTGTTGCAGCGACAAAGGGGTACAAACTTATAGTCACAATGCCTGCTTCCGTTAATGTTGAGAGGAGAATCCTTTTACGTGCATTTGGTGCAGAGGTTGTTTTGACTAATGCTGAGAAGGGGCTAAAAGGGGCAGTTGACAAAGCTGAAGAAATTGTTCACAGCACACCCAATGCTTACATGTTTCGGCAGTTTGATAACATGACTAATACAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCGTGGGTAATGTTGATGTATTGGTTGCTGGGATTGGAACTGGTGGTACTGTTACTGGCACTGGACGTTATCTTAAAATgatgaacaaaaatataaagGTGGTTGGGGTGGAACCTGCAGACAGAAGTGTTGTTTCGGGTGACAGTCCTGCTGTGACTGCATCAGAGTTTGTTGTAGGTTTCATGCCAAGCATTTTGGATATCAAACTGCTTGATGAGGTTATCaagGTTACAGATGTTGAAGCTGTCGAAATGGCAAGAAGATTAGCATTGAAAGAAGGTTTGCTGGTTGGGATTTCTTCGGGAGCTGCAGCAGCTGCAGCCATAAATTTAGCAAGACGGCCTGAGAATTCTGGGAAACTTATTGTGGTTATTTTTCCGAGTTTTGGTGAGAGATATATTTCTACTGCTCTCTTCCATTCTATCTATGAAGAGGTTCAGAAACTGTAA 1143 0.4488 MRMALSSSSCGCFSSTPLPFHLTRLHRHPIVSLKPYTRSQAQHTLAAAATPSTPPLYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNVERRILLRAFGAEVVLTNAEKGLKGAVDKAEEIVHSTPNAYMFRQFDNMTNTKIHFETTGPEIWEDTVGNVDVLVAGIGTGGTVTGTGRYLKMMNKNIKVVGVEPADRSVVSGDSPAVTASEFVVGFMPSILDIKLLDEVIKVTDVEAVEMARRLALKEGLLVGISSGAAAAAAINLARRPENSGKLIVVIFPSFGERYISTALFHSIYEEVQKL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1695 380 Gene3D - 74 366 IPR036052 -
Ssu4g1695 380 TIGRFAM cysKM: cysteine synthase 73 370 IPR005856 GO:0004124|GO:0006535
Ssu4g1695 380 Gene3D - 110 212 IPR036052 -
Ssu4g1695 380 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 41 380 - -
Ssu4g1695 380 CDD CBS_like 77 366 - -
Ssu4g1695 380 PANTHER CYSTATHIONINE BETA-SYNTHASE 41 380 - -
Ssu4g1695 380 Pfam Pyridoxal-phosphate dependent enzyme 72 358 IPR001926 -
Ssu4g1695 380 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 68 374 IPR036052 -
Ssu4g1695 380 TIGRFAM cysK: cysteine synthase A 73 370 IPR005859 GO:0004124|GO:0006535
Ssu4g1695 380 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 98 116 IPR001216 GO:0006535
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1695 Ssu-Chr4 29839327 29844277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1695 64 380 Miscellaneous Gene Families AT3G03630 76.972 6.11e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1695 K22846 - gmx:100816974 620.157