Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1691 ATGAATATGAACACTTATAGCAGATTGATCACCCTTTGGTTTGTGCTCTATGTGGGACTTTGTTCCATTACAAACTCACTAGCAGCTTCACGGCAGTGCCATTTCCCTGCCATCTTCAACTTTGGGGACTCAAATTCAGACACTGGGGGCTTTTCTGCTGCCTTTGGACAGGCTGGCCCTCCCCATGGAGAGTCCTACTTCCATCACCCTGCAGGCCGTTACTGTGATGGCCGTCTCATTATTGATTTCATAGCTAAGAAGCTGGGCCTGCCTTATTTGAATGCATATCTTGATTCGGTTGGGTCGAATTATAGCCATGGAGCTAACTTTGCAACTGCTGGATCCACCATTAGACCCCAGAATACAACCCTTCATCAGACTGGTGGTTTCAGCCCTTTCTCTTTGGATGTTCAATTCAATCAATTCAATGATTTCCAGCGCAGGACACAATTTTTTCGCAATAAAGGTGGAGTATATAAAACCTTGTTACCAAAAGCAGAAGATTTTTCTCAAGCATTATACACGTTTGATATTGGTCAAAATGACTTGACATCCGGTTACTTCCACAACATGTCCACGGATCAAGTAAAAGCATATGTTCCAGATGTTTTGGCTCAATTCAAGACCGTAGTCAAGTATGCGTATAATCATGGAGGAAGGTCATTTTGGGTTCACAATACGAGTCCTGTTGGTTGTGTGCCGTACATCATGGATCTTCACCCAGTAAAACCATCTTTAGTGGACAGAGCAGGATGTGCAACCCCTTATAATGAAGTGGCCAAGTTCTTCAATCGTGAACTGAAAGCAGTTGTGGTTCAACTCAGAAAAGAACTTCCCTTGGCTGCCATCACCTATGTTGATGTTTACTCAGTGAAGTACTCTCTTATTAGTCAAGCAAAGAAGCATGGTTTTGAGGAACCACTTAGAGCATGTTGTGGGCATGGTGGGAAGTACAACTACAATTTACACATTGGATGTGGTGCTAAGATTAAGATTCATGGCAAAGAGACTCTGGTGGGAAAGCCATGCAAGGATCCTTCTGTTTGGGTTAATTGGGATGGTGTTCATTACACTCAGGCTGCTAACAAATGGGTGTTTGATCAGATTGTAGGTGGTTCATTTTCTGACCCACCTATTCCTTTGAGCATGGCTTGTCATAAGCATCTTTAA 1170 0.4316 MNMNTYSRLITLWFVLYVGLCSITNSLAASRQCHFPAIFNFGDSNSDTGGFSAAFGQAGPPHGESYFHHPAGRYCDGRLIIDFIAKKLGLPYLNAYLDSVGSNYSHGANFATAGSTIRPQNTTLHQTGGFSPFSLDVQFNQFNDFQRRTQFFRNKGGVYKTLLPKAEDFSQALYTFDIGQNDLTSGYFHNMSTDQVKAYVPDVLAQFKTVVKYAYNHGGRSFWVHNTSPVGCVPYIMDLHPVKPSLVDRAGCATPYNEVAKFFNRELKAVVVQLRKELPLAAITYVDVYSVKYSLISQAKKHGFEEPLRACCGHGGKYNYNLHIGCGAKIKIHGKETLVGKPCKDPSVWVNWDGVHYTQAANKWVFDQIVGGSFSDPPIPLSMACHKHL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1691 389 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 29 387 - -
Ssu4g1691 389 Gene3D SGNH hydrolase 24 371 IPR036514 -
Ssu4g1691 389 PANTHER BNAA06G32900D PROTEIN 29 387 - -
Ssu4g1691 389 Pfam GDSL-like Lipase/Acylhydrolase 38 369 IPR001087 GO:0016788
Ssu4g1691 389 CDD SGNH_plant_lipase_like 36 373 IPR035669 -
Ssu4g1691 389 SUPERFAMILY SGNH hydrolase 39 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1691 Ssu-Chr4 29796304 29800270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1691 36 388 Acyl Lipid Metabolism Gene Families AT4G10950 29.235 2.43e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1691 - - gmx:100819985 766.148