Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1681 ATGTCTTCAAGAACGTTGAGGAGAAGACTCCATCATGGGGATGTTGATGGCAAAAGGCAGGAGCATTTTGAGACTTCGGGATTAGATTCTTTGAGTGAGCCCTTGCTGGCAGATGATGATTATATTGAGAATAAGAAGATATGTACTCTTGAAGATCTATGGGACGATGAGAGGAAGAAGGCGCAGTTTCATTGGACATTCATATTCTCAAACCTCATTGCACAATGGGCACAGTGGTTGGCAAATGTTGTACTAGGATCTGGATCTCTTATTGGGcgtcttttatcttttccttctGCTGCTCTAAATATGCAAAACAATAGGATGCTTCCTCCATCTCTAAGCCCTCTGCAGgaAGAAAGACTAAGAAACCTACGACAAAGGCTTGAGGTCCCCTTTGATGGTTCTAAAGCAGAGCACCAAGATGCACTTAAACAATTGTGGAAATTGGCTTACCCTGACAGGGAGCTTCCTTCACTTAGATCAGAGCTTTGGAAGGATATGGGATGGCAAGGTTCAGACCCTTCAACAGATTTTAGGGGTGGAGGATTTATATCATTAGAGAatctcatcttctttgtgatgaaGTATCCCGATTCATTCCAGCGATTATTGCATAAACAAGATGGAACCAGAGCAGAGTGGGAATATCCATTTGCGGTGGCTGGaatcaatatttcttttatgttggCACAAATGCTGGATCTTCAAGCAGGGCTTCCATCTTCTTTGGCCGGAGTACGTTTTCTCAAATTGCTCGAGGAGGATGAAATGGCATTTGATATCCTTTATTGTGTTGCCTTTCAAATGATGGATGCTCAGTGGCTAGCAAAGCGTGCAACATATATggaatttaatgATGTTTTGAAGTCCACAAGAACGCAGTTAGAGCGTGAGCTTGCTCTTGAAGACATCTCCAGCGTGAAAGATTTACCTGCTTACAACATGTTGAGATGA 957 0.4002 MSSRTLRRRLHHGDVDGKRQEHFETSGLDSLSEPLLADDDYIENKKICTLEDLWDDERKKAQFHWTFIFSNLIAQWAQWLANVVLGSGSLIGRLLSFPSAALNMQNNRMLPPSLSPLQEERLRNLRQRLEVPFDGSKAEHQDALKQLWKLAYPDRELPSLRSELWKDMGWQGSDPSTDFRGGGFISLENLIFFVMKYPDSFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQAGLPSSLAGVRFLKLLEEDEMAFDILYCVAFQMMDAQWLAKRATYMEFNDVLKSTRTQLERELALEDISSVKDLPAYNMLR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1681 318 PANTHER ENGULFMENT AND CELL MOTILITY 8 318 - -
Ssu4g1681 318 PANTHER ELMO/CED-12 FAMILY PROTEIN 8 318 - -
Ssu4g1681 318 Pfam ELMO/CED-12 family 124 289 IPR006816 -
Ssu4g1681 318 ProSiteProfiles ELMO domain profile. 139 300 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1681 Ssu-Chr4 29492077 29497474 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1681 K23538 - gmx:100799350 612.453