Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1680 ATGGGCAAGAATCCCCTTCCATCTGCAAGCAATGGAAGGAGTTCAAATTCTATCAAGATACTGAAGAGGGACACCCACTCAGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAGAAAATACTAACAGCATTTCAGCCTGTTCTTGATGACCACCTTAATGAGGAAGCTGCCTTAAACAACTGCAATGCTGCTGTGCATGATGTGGGTAAAGTTGTGGAAGATGTTGAAATACAATGGCTCAAGTTGGGATCCACTTTGGTGAATGACTTACAAGAGCAGGAAAAGAAGCTTAAACAATATATGGAGCAACTTGAAAATGCTGTGGCTGCAAGGGCTTCATTGCTTTCTCAGCTTAAACATGCACTTCAAGAACAAGAATCAAGGCAAGAGCTTGTTCGCACCCAGTTGCTAGTTGCACAAGGCCAGATCGAGAAAGTAGTTGGTATCAGGAAGCGACTTAACCAAGCAGCTGAAGCTACAGATCCGTCTCAGCCTATTTTTGTTCAATCTTCTGTATCATTTGCTCCTTTCCAAACTACCGAAGATGATAACAAGAAGGCAGCAGCTGCCGCCGTTGCTGCTAAGCTTGCTGCCTCTACATCCTCTGCCCAGATGCTTACATCTGTTCTTTCTTCTCTTGTAGCCGAAGAAGCTGCCTCCTTGAACGGTAGCTTAAATTCTACGGGATTTTCATCAGGATTACCTATTTTCAACCAAGAGAAAAGACCCAAACTTGAAAAACCAACGCCTGCTCTTGATGTTAACAATTCTGATTTGGCGAACTCTTCCTTTTATGCCAATATACAACAGCCATCATTGGCAAATGTACCACTTGCACTGTCAGTCGGCATGCAAACCGCGTCACAAGCCAATCAATTACAAGCTGCATTTCCTTCAGCACCCCCTCCCCCGCCTCATTCTTCAGCAAATCAACCATCAAATCAATATGCCCAATCAACTGGTTTGATGGCTGGGGGAATTCCTTATGGATACGGGTCAAATAACCTACCACCTCCACCTCCTTTGCCTCCTTATGTTGCAATAGGGTTATCAATGCCTGGCACTCAACCAGCACAGCAGCAACAGCAGTCTTTGCCGGGAGGATTTTACAGGCCACCTGGCATAGGGTTTTATGGGCAAAGCCACCCATCAACACCACCGCCAGTACCTAGGCAGTGA 1182 0.456 MGKNPLPSASNGRSSNSIKILKRDTHSVRIKLAVGCLPEKILTAFQPVLDDHLNEEAALNNCNAAVHDVGKVVEDVEIQWLKLGSTLVNDLQEQEKKLKQYMEQLENAVAARASLLSQLKHALQEQESRQELVRTQLLVAQGQIEKVVGIRKRLNQAAEATDPSQPIFVQSSVSFAPFQTTEDDNKKAAAAAVAAKLAASTSSAQMLTSVLSSLVAEEAASLNGSLNSTGFSSGLPIFNQEKRPKLEKPTPALDVNNSDLANSSFYANIQQPSLANVPLALSVGMQTASQANQLQAAFPSAPPPPPHSSANQPSNQYAQSTGLMAGGIPYGYGSNNLPPPPPLPPYVAIGLSMPGTQPAQQQQQSLPGGFYRPPGIGFYGQSHPSTPPPVPRQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1680 393 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 8 393 - -
Ssu4g1680 393 Coils Coil 84 125 - -
Ssu4g1680 393 MobiDBLite consensus disorder prediction 354 368 - -
Ssu4g1680 393 MobiDBLite consensus disorder prediction 350 393 - -
Ssu4g1680 393 MobiDBLite consensus disorder prediction 296 322 - -
Ssu4g1680 393 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 8 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1680 Ssu-Chr4 29465207 29475493 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1680 K15559 - gmx:100800067 557.37