Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1664 ATGAACCCAAATGCGGGTGGTGGGAAGGCGTACGGAGCATTCAGCAATGCGGTTCAGATGGTGTTGAAGGACAACCCGGGTCTGCTGAGCAACAAAGAGGTTGTGATGATGGCACGGAAGATCCTGCAAACTCGAGGGTTCGAGCAGCATCCTTGCCTCTATTGCAGCGATGAGAATGCTAATGCTGCGTTCCTGTGGCAACCTCAGAACACTGATTCGTGA 222 0.527 MNPNAGGGKAYGAFSNAVQMVLKDNPGLLSNKEVVMMARKILQTRGFEQHPCLYCSDENANAAFLWQPQNTDS 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1664 73 Gene3D - 2 68 - -
Ssu4g1664 73 PANTHER BNAA01G07720D PROTEIN 5 68 - -
Ssu4g1664 73 Pfam Caspase domain 8 60 - -
Ssu4g1664 73 PANTHER METACASPASE-4 5 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1664 Ssu-Chr4 29025148 29025369 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1664 - - qsu:112041046 119.012