Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1661 ATGGCGTCCCAAATTATCCGTGAGTGGTCAGGAATCAATACATTCGCACCTGCTACCCAGACTAAGTTGCTTGAACTCTTGGGAAAACTTAAACAGgagAATGTGAACTCCTTGACTATACTTGTGATGGGAAAAGGTGGTGTTGGAAAATCTTCCACTGTGAACTCCATCATTGGGGAAAGAGTGGTTTCAATTAGTCCTTTCCAGTCGGAAGGGCCGAGACCTGTGATGGTGTCGCGATCAAGGGCTGGTTTTACATTGAACATTATTGACACTCCTGGTCTCATTGAAGGGGGATACATCAATGATATGGCACTTGATATAATAAAACGTTTCCTTCTGAACAAGACCATAGATGTGCTGCTTTATGTGGATCGCTTGGATGTGTATAGAGTGGacaacttggataagttagttgCCAAAGCTATAACAGATAGTTTTGGCAAAGGAATATGGAACAAGGCTATAGTAGCGCTCACACATGCCCAGTTCTCTCCACCAGATGGATTGCCTTATGATGAATTCTTCTCACAAAGATCTGAGGCTCTCTTGAAGGTTCTTAGGTCAGGTGCCCGGATAAAGAAAGAAGCCTTTCAGGCTTCTTCTATTCCTGTTGTTTTGGTCGAGAACAGTGGGAGATGCAACAAAAATGACAGTGATGAAAAGGTTCTTCCAAATGGGACTGCTTGGATTCCTCATCTAGTCCAAACAATCACAGAAATTGCATTGAACAAAAGCGTGTCTATTCATGTTGACAAGGATTTGATTGAAGGGCCAAATCCGAATCAGAGAGGAAAATTATGGATTCCTATCGTGTTTGCTCTCCAATATTTCCTTCTCATCAAGCCAATAAAAGGATTGATCGAGAGGGACATTGCAAATGAGAGAAAGCCAGCATGGGAGAGACGTGATGCCGGTTATCGTAAGAGAGATTTATATTAG 942 0.4151 MASQIIREWSGINTFAPATQTKLLELLGKLKQENVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALDIIKRFLLNKTIDVLLYVDRLDVYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSQRSEALLKVLRSGARIKKEAFQASSIPVVLVENSGRCNKNDSDEKVLPNGTAWIPHLVQTITEIALNKSVSIHVDKDLIEGPNPNQRGKLWIPIVFALQYFLLIKPIKGLIERDIANERKPAWERRDAGYRKRDLY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1661 313 ProSiteProfiles AIG1-type G domain profile. 35 259 IPR006703 GO:0005525
Ssu4g1661 313 CDD Toc34_like 7 252 - -
Ssu4g1661 313 Gene3D - 2 268 IPR027417 -
Ssu4g1661 313 PIRSF Toc33/toc34 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Ssu4g1661 313 PANTHER TRANSLOCASE OF CHLOROPLAST 1 300 - -
Ssu4g1661 313 Pfam AIG1 family 38 227 IPR006703 GO:0005525
Ssu4g1661 313 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 1 300 IPR045058 -
Ssu4g1661 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 256 IPR027417 -
Ssu4g1661 313 TIGRFAM 3a0901s02IAP34: GTP-binding protein 1 310 IPR005688 GO:0006886|GO:0009707|GO:0015450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1661 Ssu-Chr4 29005381 29010729 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1661 - - gmx:100782594 580.096