Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1632 ATGCTTCCGGCGGAAACGGCGCACGCGGCGGCGGACGGCGGCTCGGACGGCTGGAGTTCCGGCGGCGGCGATGGAGGAGAAAAGTGGTCCTTCTTGTCATGGTACTTGGCTCTTCTTGGAAAATACCCTGTTCCGGTGAAAGCTCTAACATCTGCAATTTTGACACTAATTGGAGATTTGATTTGCCAGCTTGTGATAGACCAAGTGCAGTCGCTGGACTTCAAGAGGACATTCATCTTTACTTTTCTCGGTTTTGCTTTAGTGGGTCCAACATTGCATTTCTGGTATTTGTATCTGAGTAAATTGGTTACACTTCCTGGAGCATCAGGTGCACTTTTGCGGCTTGTACTTGATCAGTTCTTATTTTCTCCCATATTCATCGGAGTTTTCTTAAGTACATTGGTGACACTGGAGGGAAGACCATCACAAGCTGTACCCAAGCTTAAACAGGAGTGGTTTTCTGCAGTTCTAGCAAACTGGCAGCTGTGGATACCTTTTCAATTTCTCAACTTTAGATTTGTTCCTCAGCAATTTCAGGTCCTTGCTGCTAATGTTGTTGCTTTGGTGTGGAATGTTATTCTCTCATTTAAGGCACACAAAGAAATTCTTCCAAAATAG 618 0.4531 MLPAETAHAAADGGSDGWSSGGGDGGEKWSFLSWYLALLGKYPVPVKALTSAILTLIGDLICQLVIDQVQSLDFKRTFIFTFLGFALVGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVFLSTLVTLEGRPSQAVPKLKQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVVALVWNVILSFKAHKEILPK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1632 205 Pfam Mpv17 / PMP22 family 137 195 IPR007248 GO:0016021
Ssu4g1632 205 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2 25 200 - -
Ssu4g1632 205 MobiDBLite consensus disorder prediction 1 21 - -
Ssu4g1632 205 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 25 200 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1632 Ssu-Chr4 28370626 28373227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1632 31 201 Miscellaneous Gene Families AT2G14860 28.902 7.97e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1632 K13347 - gmx:100790392 340.117