Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1583 ATGTCATGTGAGAAGAACATGGCATCAAAATTGGAGAAGCAAAAAGATTGCATAGTTTTTTCTCTCTTAGATTTGCCTGAGTGTACCTTGGATTGCATTCTTGAGTGTCTTTCCCCACTGGATTTGTGTAGAGTGGCACAAGTGTGTACCTATTTGTGGCATAGAAGCAGAAGTGATGCTTTGTGGGAGAAACAAATCAAACAGAAATGGGGTGGGTTGCTTGGTGATGTTGCTCTCCAAGAGTGGCTGTGGCACACATCAAAGATAATAAACACAGAAAGCCTCTTGTTAAAGCAGAACCAGAGTGGATCATGTGGCTCTTTCAGTGGTGTTTGGCCTTTCCTAAGCTTTCATTCTTATTTGGAAAATTTCATTAACTTGAttagtttgtttaaaaattgtccAAAAATGGCTTTGTACATCTGTCTTGAGAGTGGCCGCTTCTGGTTTCCTGTTCAAGTGTATAAGACTGCAAATTTATGCTGTTATGATGCCATTGTCAGCTATGACTCTAGAACAGACACCTTTCAAGCAAGGTCTCCAACTGGTGGCTGGCGTATGATTGAGGGAAATATTCAGTGGGATAGGTTGAGATTATCACCGGTTGAAACTTCTCCAAGGATATTTTATATGTCTAACTGTATGAATGATTTGAAACCAGGAGATCAAATTGAGATTCAGATGAGAAGACGCAAAGATTCCCCTTACAATTGGGGGTATGCTGTAGTTGGTCATTTGGAAACATGTGACGAGGACGTGAATCATTGCCATTGCCAATACAGTGACATGTTAGTAGTGGAGTTCAAGCAGTATCAGCTCGAGAATAGATGGAGAAGATCAGTGTTAAATAGAAATGTGTATGAGGAACAGGGTTCTAGGCTTAGCTGGTTCGGTGGAATCAGAAAACTTGATAAGGAGGAGGAGATTGAAAGGTGGAACAACCTCTTTGCATCATCTAGATAA 963 0.4008 MSCEKNMASKLEKQKDCIVFSLLDLPECTLDCILECLSPLDLCRVAQVCTYLWHRSRSDALWEKQIKQKWGGLLGDVALQEWLWHTSKIINTESLLLKQNQSGSCGSFSGVWPFLSFHSYLENFINLISLFKNCPKMALYICLESGRFWFPVQVYKTANLCCYDAIVSYDSRTDTFQARSPTGGWRMIEGNIQWDRLRLSPVETSPRIFYMSNCMNDLKPGDQIEIQMRRRKDSPYNWGYAVVGHLETCDEDVNHCHCQYSDMLVVEFKQYQLENRWRRSVLNRNVYEEQGSRLSWFGGIRKLDKEEEIERWNNLFASSR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1583 320 Coils Coil 320 320 - -
Ssu4g1583 320 Gene3D - 5 102 - -
Ssu4g1583 320 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Ssu4g1583 320 PANTHER ESTS AU081301(E20138) 6 318 - -
Ssu4g1583 320 SUPERFAMILY F-box domain 20 84 IPR036047 GO:0005515
Ssu4g1583 320 Pfam F-box domain 22 50 IPR001810 GO:0005515
Ssu4g1583 320 PANTHER F-BOX PLANT-LIKE PROTEIN 6 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1583 Ssu-Chr4 27106096 27107948 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1583 - - gmx:100795992 520.39