Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1577 ATGGGAATCCTTAAGATAACCAAAAAGCACCACAAGCGTTTCAACAACCCTTTCCCTTCTTCTGTTTCAACCACCATCCCCTATGTCCAAGGTTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTCGGATCAGACCTTCTCAATTGGCAATGATTTTCAGCTTTCTTGGACCTCCAACAATGGAGGGCACCTCTCCATTTCGCATTTTTCTCAGGCAGCCAGACCCATTTGGTCAACGATCCCAGGACAGGCCTTTGTCTCAGCTGCACTGGTTGACACAGAAGTGGAAGAAAGTAGAGGATCATTTCTTGTCAAAGACAAAGATGTTCATTTGGTTTGCAATCACCAAACCATTGAGGATATTAGGGTGATCAATAGTCAATTTGATCATCATTTGGAATGTGAAGTTGCAGATTCTCCTTCTGTGTGTCAAGAGTTGGAAAAGAAAACTGATGCGCAAGAGATTCACCCTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGACTAAGAAGAGCAGAAGGTTTCAAAAGCATGGCATTCAAGCAACTATGCAGTTTGAAGCAAAAGGGCCCTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTTAAGATTGAGAAACCCAATTTCATTTCACGCAAACAGGTGTCTACAACAGCTTCAGGAGTGTACCAGGGCTTCAAGAGGAGGCTGAGTAATCGGAAAAAGAGACTGGGTTGGTGTTGGTACCTTTCAAGGCCAAGAGGGTTTGTGCTAGTTTCGTCAGTGGAGGAAGAGATAGGAGGAGACTTGGATATCCCAAATTCAGAAGAATTCAACAGAGTATGGTTGACATATGCAAGTGATGAGAATGAGAGATTTTATGGTTTTGGGGAGCAGTTTTCTCACATGAATTTCAAAGGCAAAAGGGTGCCCATCTTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCTATTACCTTGGCTGCTAACTTGGTCAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCACTCTACATAACATCCAAAATGAGGTCTGTCTACCTTGAAGGATATGATTATACTGTCTTCGATCTTACTAGACTTGACAGAGTACAGATAAAGATACATGGAAACTCAGTTGAAGGGCGGATATTGCACGGGAACTCACCTTGTGAACTGATTGAACGTTCCACAGAAAGCATTGGAAGGCTACCTGAGCTTCCAGAGTGGATAATATCTGGTGCTATAGTTGGAATGCAGGGAGGCACAGATGTTGTAAGTCATATTTGGGATGAACTAAGGACTTATGATGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGGCAGAGAGAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATGCACAAAGGTATTGGGGATGGAAGGAACTTATCAAAGATCTTAGCTCTCAGAATATAAAAGTTATGACATATTGCAATCCCTGTCTAGCTCCGGTTGatgagaaacaaaacaaaaggagaAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTGAAAGACAGCAATGGAAATCCATACATGGTTCCAAACACGGCTTTTGATGTAGGAATGCTAGATCTAACACACCCAAAAACTGCAACTTGGTTCAAGCAGATTCTACGAGAAATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATACCCAGAACTATGGGCCAAAATTAACAGAGAGCTTGTGGAAGAATGGAAAAGTAATTCCTTGGACAAGGTGAAGCAAGACAAAGAGGAGGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGTCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTGAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATACTGTACAGTAAACTTGCCTATAGTTAAATATAGAAGAAGTGAAGAATTGCTTTTGCGATGGATGGAGCTAAATTCTTTTACCACTGTCTTCCGCACCCATGAAGGAAACAAGCCATCATGCAACAGCCAATTTTACTCAAACCAACAAACTCTGTTACACTTTGCACGATCTGCCAAAGTATACAGAGCATGGAAATTTTACCGAATTCAACTGGTGAAGGAAGCTGCACAGAAAGGATTGCCCGTATGTCGCCACCTATTTATCCATTATCCGAATGATGAACGTGTGCATCATTTGAGTTATCAGCAGTTCTTGGTTGGTTCCGAGTTCCTAGTGGTGCCTGTCCTtgacaaaggaaagaaaaaagtcaAAGCTTATTTTCCATTGGGAGAGAGTAACAGTTGGCTCCATATCTGGACAGGAAAAGTAATTTCCAAACAAGGAAGCGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTATTTGTTAAGGTTGGCTCCCTTGTTGGAGAAACCTTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2634 0.4172 MGILKITKKHHKRFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGNDFQLSWTSNNGGHLSISHFSQAARPIWSTIPGQAFVSAALVDTEVEESRGSFLVKDKDVHLVCNHQTIEDIRVINSQFDHHLECEVADSPSVCQELEKKTDAQEIHPPTLMITGRLFNMTKKSRRFQKHGIQATMQFEAKGPSVYARYWVLFNQKTNHEVGFQVKIEKPNFISRKQVSTTASGVYQGFKRRLSNRKKRLGWCWYLSRPRGFVLVSSVEEEIGGDLDIPNSEEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLVSYRAGGDWSTTYAPSPLYITSKMRSVYLEGYDYTVFDLTRLDRVQIKIHGNSVEGRILHGNSPCELIERSTESIGRLPELPEWIISGAIVGMQGGTDVVSHIWDELRTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDAQRYWGWKELIKDLSSQNIKVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTATWFKQILREMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINRELVEEWKSNSLDKVKQDKEEGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSEELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNQQTLLHFARSAKVYRAWKFYRIQLVKEAAQKGLPVCRHLFIHYPNDERVHHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESNSWLHIWTGKVISKQGSEEWVEAPIGYPAVFVKVGSLVGETFLNNLRSLGIL 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1577 877 PANTHER SULFOQUINOVOSIDASE 29 875 - -
Ssu4g1577 877 CDD GH31_N 283 413 - -
Ssu4g1577 877 SUPERFAMILY (Trans)glycosidases 404 772 IPR017853 -
Ssu4g1577 877 SUPERFAMILY Galactose mutarotase-like 280 401 IPR011013 GO:0003824|GO:0005975|GO:0030246
Ssu4g1577 877 Coils Coil 510 530 - -
Ssu4g1577 877 Gene3D glycosyl hydrolase (family 31) 239 397 - -
Ssu4g1577 877 Gene3D Glycosidases 400 805 - -
Ssu4g1577 877 Gene3D - 806 858 IPR013780 -
Ssu4g1577 877 SUPERFAMILY Glycosyl hydrolase domain 774 858 - -
Ssu4g1577 877 CDD GH31_glucosidase_YihQ 413 751 IPR044112 -
Ssu4g1577 877 Pfam Glycosyl hydrolases family 31 396 862 IPR000322 GO:0004553|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1577 294 849 Glycoside Hydrolase AT3G45940 24.027 1.21e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1577 - - gmx:100779005 1701.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1577 4 27043413 27048484 Ssu4g1577 4 27043413 27048484 ECH