Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1574 ATGCCTCCTATTGAAGCTATTATCACTCCCCTGGAGGCAGAGCTCAAGCTTGCTAGGATGGAGgtGGCAAAGCTGCAGGATGACAACAGAGCACTAGATCGGCTTACCAAATCGAAGGAGGCTGCACTTCTTGAGGCTGAGAGAACTGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAATCAAGAGTTAATGAAACAGATTGAAATATGCCAgGAGGAGAACAAAATCTTGGACAAAATGCTTCGGCAAAAGGTTGCtgaagttgaaaaattaacCCAAACTGTTcgtgagcttgaagaggctgtCTTGGCTGGTGGGGCTGCTGCTAATGCTGTCCGCGATTACCAGCGTAAAGTGCAAGAGATGAATGAGGAAAGGAAAATTTTGGAGCGGGAAGTAGCTCGTGCCAAAGTTACTGCAAACAGGGTTGCGACTGTAGTTGCAAATGAGTGGAAAGATGCTAATGATAAAGTGATGCCTGTGAAACAGTGgctagaagaaagaaaatttttccaGGGTGATATGCAACAATTACGTGATAAATTGGCTATAGCTGAGCGCACTGCAAAGGCAGAGGCACAAATGAAgGAAAAATATCAATTGCGCTTCAAAGTTTTGGAAGAAAGGGTTAAGGCATCTAATGGTAATTCCAAATTCACTGTATCAGATGGAAGAAACATTGCCACTGGGCCTTCACGACGACAGTCTTTTGGTGGAGCTGAGAGTCTCTCTGCATCCTCTTCCAATGGATATCTATCAAGGAAAAACTCAATTTCAAGATCAGGATCTCTAAGATCAAATAGTGCTAATGTGTTACTAAAACATGCCAAACTTTCATCTAGATCATTCGATGGTGGTAGGCCAACTTCAGATGCAAATGGGCTAGATAACAGGCCAGCAAACACCAATAATCAGACCATCACCAGTGAGACAATTATTACACATGAGAGTGCAAATGGTACTCCAGTTGAAAAATCTAAAGCAGAAAATGAAGACTATGTTTCAGGAATGCTGTATGACATGTTGCAAAAAGAGGTTATATCTTTGAGGAAAGCTTGTCATGAAAAAGACCAAACTCTTAAAGACAAGGATGATGCAATAGAGATGTTGGCAAAGAAGGTTGATACGTTGAACAAGGCTATGGAAGTTGAGGCCAGAAAAATGCGTAGGGAAGTAGCTTCTATGGAAAAGGAGGTTGCTGCAATGCGTATTAGCAAGGAACATGATCATAGGGTGCGGCGAGCTAGTGCTCCTAGGGGGGCTGTAAATTCCCAGTCAATTTCTGCCAGGAGTGCACGTAACTTTTAG 1329 0.4078 MPPIEAIITPLEAELKLARMEVAKLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKILDKMLRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKILEREVARAKVTANRVATVVANEWKDANDKVMPVKQWLEERKFFQGDMQQLRDKLAIAERTAKAEAQMKEKYQLRFKVLEERVKASNGNSKFTVSDGRNIATGPSRRQSFGGAESLSASSSNGYLSRKNSISRSGSLRSNSANVLLKHAKLSSRSFDGGRPTSDANGLDNRPANTNNQTITSETIITHESANGTPVEKSKAENEDYVSGMLYDMLQKEVISLRKACHEKDQTLKDKDDAIEMLAKKVDTLNKAMEVEARKMRREVASMEKEVAAMRISKEHDHRVRRASAPRGAVNSQSISARSARNF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1574 442 MobiDBLite consensus disorder prediction 426 442 - -
Ssu4g1574 442 Coils Coil 367 412 - -
Ssu4g1574 442 MobiDBLite consensus disorder prediction 287 336 - -
Ssu4g1574 442 Coils Coil 168 202 - -
Ssu4g1574 442 Coils Coil 8 35 - -
Ssu4g1574 442 MobiDBLite consensus disorder prediction 301 331 - -
Ssu4g1574 442 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-1-LIKE 1 437 - -
Ssu4g1574 442 Pfam Microtubule-associated protein 70 1 433 IPR009768 GO:0007010|GO:0008017
Ssu4g1574 442 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 1 437 IPR009768 GO:0007010|GO:0008017
Ssu4g1574 442 MobiDBLite consensus disorder prediction 409 442 - -
Ssu4g1574 442 MobiDBLite consensus disorder prediction 223 271 - -
Ssu4g1574 442 Coils Coil 119 146 - -
Ssu4g1574 442 Coils Coil 60 108 - -
Ssu4g1574 442 MobiDBLite consensus disorder prediction 409 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1574 Ssu-Chr4 26991429 26995228 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1574 - - gmx:100814485 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1574 4 26991429 26995228 Ssu4g1574 4 26991429 26995228 ECH