Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1570 ATGATTGGTAAAGACAGCGGTGTTATGAAGGCATGGGAGGCAACGATGAGAAAGACACATGCAGTTGCCAAGAAGCGTGCCAACAGCATATTCGGGACGATATCTTTGGCACAGGTTGCAGATGAAGAAGATAACAATGATGATTATGATGATCACGAAGAGAATGGGAGCGTGAACTTTGAAGTGTCCATTGAAGAGAAGGTTCTGCCAAATGGGGATTACTATACGGGGGAATGGGCTAATAACTTCCCACATGGGCTAGGGAAATACCTGTGGACCGATGGGTGCATGTACGTTGGAGAATGGTTCAGAGGGAAAACTAAGGGAAAGGGTAGGTTCAGTTGGCCTTCGGGGGCTACATATGAAGGGGAGTTCAAGAGTGGTTTCATGGATGGGACGGGGACTTACATAGGGTGTAATGGGGAGACTTACAAGGGGAAGTGGGCGATGAATTTGAAACATGGTCATGGTTTTAAGAGTTATGTTAATGGGGATTGGTATGATGGAGAGTGGAGGAAGGATTTGCAGGATGGGGAGGGGAGGTATGAGTGGAAGGATGAGAGCCATTATGTCGGGGAGTGGAGGAATGGGACTATTTGGGGCAAAGGGTCATTTGTTTGGGCTGATGGGAGACAGTTTGAAGGGTTTTGGGAAGACGGTTTGCCAAAAGGGAATGGGACTTTCAAGTGGCCTGACGGGAGTTTTTATGAGGGGAATTTCAGCAAGGATGGTAAGGATCAGAATGGGACATACCATCCAAGTGAGTTATCGGAGGAGGGGGGGCATAGTGAGTGGGATCCTCAAGAGTTGTGTAAGGAGTTGAGTGGGTATTCGGTTTGCCCTGGAGAGAAGGTTCAGGTTATGCCATCACACAAGAAGCTTGCGATTTGGAGGTCTTCAAAGGCAGGGGAGAGTGCTAGAAATAGGAGAATGTCAGTGGATGGAAGGGTGAGTGTTGGCTTGGAGAAGCCAAGTGATAGATTGCAAATATGGGATGGTAGGGAGAGTGATGCTAGTGGTGCTAAAACTCCAACTATGGGGAGTGATCTGGATGAAGATTTGATGGGTTTACGTGTAGATGATGCTAGTGAAAGCCTGGGTCAACTTCAACCTCTGAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGACCATTTGTAAAGGACACAAAAATTATGAGCTAATGCTCAATTTGCAGCTGGGAATCAGGCATTCTGTTGCAAGGCCTGCTCCCACAGCATCACTTGATCTTAAGCCTTCAGCTTTTGATCCCAAGGAGAAAGTGTGGACAAGATTTCCACCCGAAGGATCCAAATATACCCCACCACATCCATCGTGTGACTTTAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAACTCTTAGGAAGCTATTCAAGGTGGATCCAGCTGATTACATGTTATCCATATGTGGAAACGAAGCCCTTCGTGAACTTTCCTCTCCTGGAAAAAGTGGCAGCTTCTTTTACTTGACCAATGACGACCGTTACATGATTAAGACAATGAAGAAAGCTGAAGTGAAAgttctattgagaatgCTACCAGCCTATTACAATCATTTTAGAGACCACCAAAATACTCTTTTGACAAAGTATTATGGTCTGCATTGTGTAAAGTTAAATGGACCTATTCAGAAGAAGGTTCGATTTATCATAATGGGCAACCTCTTCTGTTCTGAGTATATCACCCATAGACGCTACGATTTGAAGGGTTCTTCACTTGGACGCACCTCAGAGAAGCCTGAGACAGAGATTAGTGAAACCACTATCCTTAAAGATCttgatcttaattttatatttcgaCTGGAGAAGTCCCGGTTTGAAGAATTTTGCAGACAAGTTGATAGGGACTGTGAGCTTCTGGAACAGGAGGGGATTATGGACTATAGTCTGCTAGTGGGCATTCATTTCAAAGATATATCGTCAGATGGGGAAATTATTCCTTCACAATCTCGGACTCCTGCTGGGGATTCAGAAAATGAAGGAACTCCCCATACTTCAATTGAAGACACGGATCAACTTCCTTCTGATCCTTCCAGTATCATATTGGGTATGAATATGCCAGCAAGGGTTGAAAGAACAGTGAGAAGAAGTGGTTGCGAATTACAGCTTGTAGGAGAACCAATTGGAGAGTTCTATAATGTTGTGTTGACTTTTGGTATCATAGACATACTTCAAGACTATGACATTAGCAAGAAGCTTGAGCATGCCTACAAATCTATTCAGTATGACCCGACCTCAATATCAGCTGTTGATCCTATACAATATTCAAGGCGTTTTCGTGATTTCATATTTAGAATATTCACTGAAGACTCTTGA 2337 0.4369 MIGKDSGVMKAWEATMRKTHAVAKKRANSIFGTISLAQVADEEDNNDDYDDHEENGSVNFEVSIEEKVLPNGDYYTGEWANNFPHGLGKYLWTDGCMYVGEWFRGKTKGKGRFSWPSGATYEGEFKSGFMDGTGTYIGCNGETYKGKWAMNLKHGHGFKSYVNGDWYDGEWRKDLQDGEGRYEWKDESHYVGEWRNGTIWGKGSFVWADGRQFEGFWEDGLPKGNGTFKWPDGSFYEGNFSKDGKDQNGTYHPSELSEEGGHSEWDPQELCKELSGYSVCPGEKVQVMPSHKKLAIWRSSKAGESARNRRMSVDGRVSVGLEKPSDRLQIWDGRESDASGAKTPTMGSDLDEDLMGLRVDDASESLGQLQPLKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFKVDPADYMLSICGNEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLLRMLPAYYNHFRDHQNTLLTKYYGLHCVKLNGPIQKKVRFIIMGNLFCSEYITHRRYDLKGSSLGRTSEKPETEISETTILKDLDLNFIFRLEKSRFEEFCRQVDRDCELLEQEGIMDYSLLVGIHFKDISSDGEIIPSQSRTPAGDSENEGTPHTSIEDTDQLPSDPSSIILGMNMPARVERTVRRSGCELQLVGEPIGEFYNVVLTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPIQYSRRFRDFIFRIFTEDS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1570 778 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 477 772 IPR002498 GO:0016307|GO:0046488
Ssu4g1570 778 Pfam MORN repeat 144 165 IPR003409 -
Ssu4g1570 778 Pfam MORN repeat 167 186 IPR003409 -
Ssu4g1570 778 Pfam MORN repeat 190 210 IPR003409 -
Ssu4g1570 778 Pfam MORN repeat 213 234 IPR003409 -
Ssu4g1570 778 Pfam MORN repeat 98 119 IPR003409 -
Ssu4g1570 778 Pfam MORN repeat 121 142 IPR003409 -
Ssu4g1570 778 Pfam MORN repeat 75 97 IPR003409 -
Ssu4g1570 778 Gene3D - 562 774 - -
Ssu4g1570 778 SMART morn 119 140 IPR003409 -
Ssu4g1570 778 SMART morn 211 232 IPR003409 -
Ssu4g1570 778 SMART morn 142 163 IPR003409 -
Ssu4g1570 778 SMART morn 165 186 IPR003409 -
Ssu4g1570 778 SMART morn 96 117 IPR003409 -
Ssu4g1570 778 SMART morn 234 255 IPR003409 -
Ssu4g1570 778 SMART morn 188 209 IPR003409 -
Ssu4g1570 778 SMART morn 73 94 IPR003409 -
Ssu4g1570 778 CDD PIPKc_AtPIP5K_like 391 773 - -
Ssu4g1570 778 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 376 561 IPR027484 -
Ssu4g1570 778 Gene3D - 100 149 - -
Ssu4g1570 778 Gene3D - 150 200 - -
Ssu4g1570 778 SUPERFAMILY SAICAR synthase-like 387 774 - -
Ssu4g1570 778 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 162 249 - -
Ssu4g1570 778 SMART PIPK_2 418 775 IPR002498 GO:0016307|GO:0046488
Ssu4g1570 778 MobiDBLite consensus disorder prediction 652 682 - -
Ssu4g1570 778 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 17 777 IPR023610 -
Ssu4g1570 778 MobiDBLite consensus disorder prediction 239 265 - -
Ssu4g1570 778 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 388 774 IPR002498 GO:0016307|GO:0046488
Ssu4g1570 778 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 70 190 - -
Ssu4g1570 778 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 17 777 - -
Ssu4g1570 778 PIRSF PIP5K_plant 10 778 IPR017163 GO:0005524|GO:0016308
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1570 Ssu-Chr4 26856111 26861284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1570 1 778 Acyl Lipid Metabolism Gene Families AT3G56960 65.565 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1570 K00889 - gmx:100808754 1483.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1570 4 26856111 26861284 Ssu4g1570 4 26856111 26861284 ECH