Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1564 ATGGGTGGGTCATCGGAGGACTTCTCGGTGGTGGTGTTGGCATCGGACCTCGGCGTGGATGCACGACCCTTCCTCGaacatcaacatcaacatcaacatcaacaccaacaacaacagGAAGAAGACAAGTGGCACGACTGTTCCCAATACCTCTCCCCCGACGAGGACTTCTCCGATCTCGATCTCTTGCAATTCCTCCGCCTCCAAGGCTCCGACAAAAACTCCAATCCCATTCTCCGCATCGTCGGCAAGTACTTTCCAGCAACCGTTGTGAGTGCAGAGCGGCTGAAGAGGTACGTGTTTCACACGATTTGCAGTGGGTTGCCAGATGGGCCATTCTGTATTGTTTACATGCACAGCACTGTCCAGAAGGAGGATAATTCCCCTGGCATGACCATCTTAAGGTGGATTTATGAAGAACTTCCTGCTGATTTCAAGGACAGGCTTCAAACTGTGTATTTCGTGCATCCCGGCCTTCGCTCCCGACTAGTCATCGCCACTCTTGGCCGCTTTTTCTTGAGTGGAGGATTATATTGGAAGATCAAGTATGTAAGCAGGCTTCAGTACCTTTGGGATGATATAACGAAGGGAGAGGTTGAGATACCAGATTTTGTGAAAAGTCATGATGATATTCTGGAGAATAGACCACTCACAGATTATGGCATTGAACCTGACCCCTTTCACTTGACTGGGATGCCTTCGTCTACCTTCTCATTTGGGAAATACGAGGAGAGATGGGCGGCAAGGGATTATGTGTCTTAG 762 0.4711 MGGSSEDFSVVVLASDLGVDARPFLEHQHQHQHQHQQQQEEDKWHDCSQYLSPDEDFSDLDLLQFLRLQGSDKNSNPILRIVGKYFPATVVSAERLKRYVFHTICSGLPDGPFCIVYMHSTVQKEDNSPGMTILRWIYEELPADFKDRLQTVYFVHPGLRSRLVIATLGRFFLSGGLYWKIKYVSRLQYLWDDITKGEVEIPDFVKSHDDILENRPLTDYGIEPDPFHLTGMPSSTFSFGKYEERWAARDYVS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1564 253 PANTHER OS01G0948300 PROTEIN 3 252 - -
Ssu4g1564 253 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 3 252 - -
Ssu4g1564 253 SUPERFAMILY CRAL/TRIO domain 67 196 IPR036865 -
Ssu4g1564 253 Gene3D - 54 199 IPR036865 -
Ssu4g1564 253 Pfam Divergent CRAL/TRIO domain 76 209 IPR001251 -
Ssu4g1564 253 CDD SEC14 54 206 IPR001251 -
Ssu4g1564 253 SMART sec14_4 59 210 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1564 Ssu-Chr4 26661951 26663536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1564 - - gmx:100527837 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1564 4 26661951 26663536 Ssu4g1564 4 26661951 26663536 ECH