Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1560 ATGGCAGAGCTATTTGTGAAGCAGGCAAAGCAATACGCTGATGCAAGACCAAGTTATCCTCCACAACTCTTCCAATTCATTGCTTCAAAGACTCCCTCTCACTCCCTCGTTTGGGACGATGGCACTGGAAGCGGCCAAGCGGCCAAATCTTTAGCCATGTTATACAAGAACGTGATAGCCACAGATGCTAGTGAGAAACAACTTGAATTTGCGGCCAAGCTCCCTAACGTGCGATACCAACATACCCCATCAACCATGTCCATGGCCGAGCTTGAACAAATGGTGGCACCTCAAGGAACCGTAGACCTTGTGACCATAGCCCAAGCCCTGCACTGGTTTGACCTCCCAACCTTCTACGAACAAGTCAGGTGGGTTCTCAAGAAACCTCACGGAGTCATTGCTGCTTGGTGTTACTATTTGCCAAGAGTTAGTGATGCAGTAGACACTGTCCTTGATCAATTCTATTCCACTGATGTAAGCCCTTATTGGGACCCAGCACGTAAATTGGTTGATAACATTTATAGAAGCATTGATTTTCCATTTGAGCCTGTGGATGGAGCTGATCACACGGGACCCTTTGAGTTTGTGACAGAGACTCTGATGGATTTGGATGATTTCTTGACTTACATAAAATCATGGTCAGCATATCAGACAGCAAAGGAAAAAGGAGTGGAGCTTCTTGGGGAGGATGTAGTTAGAAAATTTAAGCTTGCTTGGGGTGAAGATGGTCAAAAGGTTGCCAAGTTTCCAATTTATTTGAGAATTGGAAGGGCAGGGGATGCCTAA 786 0.458 MAELFVKQAKQYADARPSYPPQLFQFIASKTPSHSLVWDDGTGSGQAAKSLAMLYKNVIATDASEKQLEFAAKLPNVRYQHTPSTMSMAELEQMVAPQGTVDLVTIAQALHWFDLPTFYEQVRWVLKKPHGVIAAWCYYLPRVSDAVDTVLDQFYSTDVSPYWDPARKLVDNIYRSIDFPFEPVDGADHTGPFEFVTETLMDLDDFLTYIKSWSAYQTAKEKGVELLGEDVVRKFKLAWGEDGQKVAKFPIYLRIGRAGDA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1560 261 CDD AdoMet_MTases 37 140 - -
Ssu4g1560 261 PANTHER OS01G0307686 PROTEIN 1 260 - -
Ssu4g1560 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 167 IPR029063 -
Ssu4g1560 261 Pfam Methyltransferase domain 40 128 IPR013216 GO:0008168
Ssu4g1560 261 Gene3D Vaccinia Virus protein VP39 6 257 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1560 Ssu-Chr4 26632869 26633865 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1560 - - gmx:100784891 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1560 4 26632869 26633865 Ssu4g1560 4 26632869 26633865 ECH