Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1559 atggCAGAGCTATTTGTGAAACAGGCACGGCAATATGCAGATGCAAGACCAAGTTATCCTCCACAACTCTTCCAGTTCATCGCTTCGAAGACTCCCTCTCACAACCTCGCCTGGGACGTCGGCACAGGAAGCGGCCAAGCTGCCAAATCTTTAGCCATGTTGTACAAGAACGTGATAGCCACAGATGCTAGTGAGAAACAACTTGAATTTGCAGCCAAGCTCCCTAATGTGCGATACCAACATACCCCTTCAACCATGTCCATGACCGAGGTTGAACAAATGGTGGCACCTCAGGGAACCATAGACCTTGTAACCATAGCCCAAGCCATGCACTGGTTTGACCTCCCAACCTTCTACGAACAAGTCAAGTGGGTTCTCAAGAAACCTCATGGAGTCATTGCTGCTTGGTGTTACTATTTGCCAAGAGTTAACAGTGCAGTAGACACTATCCTTGATCAATTATATTCCTCTGATGCAAGCCTTTATTGGGATTCAGCATGTACACTGTTTGATGATAAATATAGAAGCATTGATTTTCCATTTGAGCTTGTTAACGGGACAGATCACACGGGACCGTTTGAGTTTGTGACGGAGACTGTGATGGATTTGGATGATTTCTTGACTTACATAAAATCGTGGTCAGCATATCAGACGGCAAAGGAGAAAGGAGTGGAGCTTCTTGGGGAGGATGTTGTTCAAAAGGTTAAACTTGCTTGGGGTGAAGATGAAAAAAGATTGCCAAATTTCCAGTTTATCTGA 759 0.4466 MAELFVKQARQYADARPSYPPQLFQFIASKTPSHNLAWDVGTGSGQAAKSLAMLYKNVIATDASEKQLEFAAKLPNVRYQHTPSTMSMTEVEQMVAPQGTIDLVTIAQAMHWFDLPTFYEQVKWVLKKPHGVIAAWCYYLPRVNSAVDTILDQLYSSDASLYWDSACTLFDDKYRSIDFPFELVNGTDHTGPFEFVTETVMDLDDFLTYIKSWSAYQTAKEKGVELLGEDVVQKVKLAWGEDEKRLPNFQFI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1559 252 Pfam Methyltransferase domain 39 128 IPR013216 GO:0008168
Ssu4g1559 252 PANTHER OS01G0307686 PROTEIN 1 245 - -
Ssu4g1559 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 176 IPR029063 -
Ssu4g1559 252 CDD AdoMet_MTases 38 140 - -
Ssu4g1559 252 Gene3D Vaccinia Virus protein VP39 6 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1559 Ssu-Chr4 26621948 26622951 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1559 - - gmx:100784891 433.721