Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1556 ATGGGTTGCTCAGCCTCAAGAACCATCACCATAGTGGCCAACAGTAACCCAGAGGATCCCTCTCCTTCTGCTtctcttacttcttcttctttctcttcctcttctgcCTCACACAATTCCAATTCTTCACCACCAGTTGGAAGAAGAGCTCTTTCTCTCCCAGTGCCTCTTGTCCATCACCCTCCCATCAAAAAGGGTGACACACACCACCTTGTCTCcctcacctccaccacctatgGCTCCCTTCTCCTCGTTGACCAAAAAGACCCCAACTCGAGCCTCAAGGACCAACCCCTCCTCACCAAAACCTCACACCAAACTGAGCCAGAACACTCACTCTCCCCAGACTCAGTCATCAACACTTGGGAACTCATGGATGGCTtggatgatgaagaagaagaaattgccAAGCCTCCTTACACTTGCATTTTAGACAAACCAAGTTCATGCAGGTACACAGTCTTTGATGGGTCAGCAAGGAAGAAACTGCTTGATTCCTTTGAATCGATGAAAACTTCACAAACAGCAACGGAAAATTCTTCTTCCTTCCCAGCTTCAACCAAGAAGCCACTTTGGCAGCACTTATCTGAGGAAGCTTTGCTTGCTAAGTTGGACCCAAGTGTGGCTTGGAGTTACAGGAGAGCATTATCATCAAGGCAACTAGGTAGAAACACCCTATGCAGAGATGTAAGGTCAATGGGGTCTAGCCCTTTGagattctcttcttctttttcatttggtACCAATAATTTGTGCCGTTTGCCTGGCACTGAAGACAGAATAGTGCTTTATTGTACTAGTTTGAGAGGGATCCGCAAGACCTACGAGGATTGTTGTTCGGTTAAGATGATGCTGAGGGGCTTCAGAGTTGCGGTTGATGAGAGGGACATCTCAATGGACTCGTCCTATAGGAAGGAGTTGCAGGATGTGCTTGGTGGCAAGGCTGTGACCTTGCCTCAGGTCTTTATCAGAGGGAAGTATGTGGGGAATGCTGAGGAAATGAAGCATCTGAATGAGTCTGGAGAATTGGCAAGGCTTTTGGAGGGTTTCCCCACTCAGGATCCTGGGTTTGTTTGTGACAACTGTGGTGATGCCAGGTTTGTGCCATGCCCCAATTGCAATGGTAGTAGGAAGGTGTTTGAGAATGAAGATGGAGGATTGAGAAGGTGCCCTGATTGCAACGAGAATGGCTTGATAAGATGCCCAGGTTGCTGCTCATGA 1221 0.4406 MGCSASRTITIVANSNPEDPSPSASLTSSSFSSSSASHNSNSSPPVGRRALSLPVPLVHHPPIKKGDTHHLVSLTSTTYGSLLLVDQKDPNSSLKDQPLLTKTSHQTEPEHSLSPDSVINTWELMDGLDDEEEEIAKPPYTCILDKPSSCRYTVFDGSARKKLLDSFESMKTSQTATENSSSFPASTKKPLWQHLSEEALLAKLDPSVAWSYRRALSSRQLGRNTLCRDVRSMGSSPLRFSSSFSFGTNNLCRLPGTEDRIVLYCTSLRGIRKTYEDCCSVKMMLRGFRVAVDERDISMDSSYRKELQDVLGGKAVTLPQVFIRGKYVGNAEEMKHLNESGELARLLEGFPTQDPGFVCDNCGDARFVPCPNCNGSRKVFENEDGGLRRCPDCNENGLIRCPGCCS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1556 406 Gene3D Glutaredoxin 259 351 - -
Ssu4g1556 406 ProSiteProfiles Glutaredoxin domain profile. 249 354 - -
Ssu4g1556 406 MobiDBLite consensus disorder prediction 1 47 - -
Ssu4g1556 406 CDD GRX_GRX_like 260 401 - -
Ssu4g1556 406 Pfam Glutaredoxin 262 328 IPR002109 -
Ssu4g1556 406 PANTHER GLUTAREDOXIN FAMILY PROTEIN 33 405 - -
Ssu4g1556 406 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 33 405 - -
Ssu4g1556 406 MobiDBLite consensus disorder prediction 1 50 - -
Ssu4g1556 406 MobiDBLite consensus disorder prediction 90 114 - -
Ssu4g1556 406 SUPERFAMILY Thioredoxin-like 257 348 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1556 Ssu-Chr4 26599048 26600268 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1556 K17479 - gmx:100811817 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1556 4 26599048 26600268 Ssu4g1556 4 26599048 26600268 ECH