Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1551 ATGAGGCCCCAGCTGCACTTCGCGGCGGCTGTCACGGCGGTTGTTGTGACCGCTTGGGTTGCGCACAACAACGGCGGCGTTGGGCCATCCGAGGACGAGGCTTGGCAGTACGAGGCTGTTCCGATTGACGGCGCCGTTGGACCGGAGAGCTTCGCCTTTGATCCTCGAGGCGAAGGTCCTTACACTGGCGTTTCCGACGGTCGAATCATCAAATGGCACCGCACACAGAATCGTTGGTCCAACTTTTCCGCTACTTCTTCACACAGAGATGATGAATGTGGAGGACCATATGATCAGCATCCCAAGAAAGAGCACATATGTGGGCGCCCACTTGGGTTGTGCTTTAGCATATTATCGGGTGACCTTTACATTGCTGATTCTTACAAGGGCTTAGTTGTTGTTGGCCCCAATGGTGGCATTACTAGAAGACTCATATCACACGTAGAAGGTGAACCCTTGGTATTTACAAATGGTTTGGATGTTGATCCACGAACTGGAGCAGTGTACTTCACCAGCAGTAGTTCAAAATATCAAAGGAGGAATTACATCTCTTTGATCCTAAGCAGAGATAAAACGGGGAAGCTGATGAAATATGAACCACAAAGTGAACGAGTTAGCATTCTTCTAAACAATCTCTCGTTTGCAAATGGAGTAGCATTAAGCAAAGATGGTGACTATATTCTAATAATAGAGACCACAACCTGTAGAGTACTAAGGTATTGGCTAGAAACACCAAAAACTGGAACCTTGGAAGTCTTTGCTGATCTACCAGGTTTCCCGGACAACATCAAACGGAGTCCAAGAGGGGGATTTTGGGTGGGAATTTACTCAAGAAGAGAAAAACTTATCCAATGGATTCTATCATATCCTTGGATTGGAAAAGTTTTGCTTAGGCTTCCTTTAGACATCACAAAAGCTTATTCATATTTGGCTAAGCTGAAAAGGAGTACCGGATTGGCAATTAGGCTAAGTGAGCAGGGTgatatattagaaattattgaaGACAAAATTGGGAAAAAAGGGAGGTCTATTAGTGAAGTGGAGGAAAGAGATGGGATATTATGGGTGGGATCCATAGATGCACCTTTTGTTGCTAAGTATAACATTCatgttgaaaaagaacaagtcaaaggatttgaagatttttttttcagtgtTTCTCACTTTGTTGTTACTTGA 1179 0.4266 MRPQLHFAAAVTAVVVTAWVAHNNGGVGPSEDEAWQYEAVPIDGAVGPESFAFDPRGEGPYTGVSDGRIIKWHRTQNRWSNFSATSSHRDDECGGPYDQHPKKEHICGRPLGLCFSILSGDLYIADSYKGLVVVGPNGGITRRLISHVEGEPLVFTNGLDVDPRTGAVYFTSSSSKYQRRNYISLILSRDKTGKLMKYEPQSERVSILLNNLSFANGVALSKDGDYILIIETTTCRVLRYWLETPKTGTLEVFADLPGFPDNIKRSPRGGFWVGIYSRREKLIQWILSYPWIGKVLLRLPLDITKAYSYLAKLKRSTGLAIRLSEQGDILEIIEDKIGKKGRSISEVEERDGILWVGSIDAPFVAKYNIHVEKEQVKGFEDFFFSVSHFVVT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1551 392 Pfam Strictosidine synthase 157 244 IPR018119 GO:0009058|GO:0016844
Ssu4g1551 392 Gene3D - 35 379 IPR011042 -
Ssu4g1551 392 SUPERFAMILY Calcium-dependent phosphotriesterase 36 373 - -
Ssu4g1551 392 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 14 364 - -
Ssu4g1551 392 PANTHER STRICTOSIDINE SYNTHASE-RELATED 14 364 - -
Ssu4g1551 392 Pfam Strictosidine synthase-like, N-terminal 38 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1551 Ssu-Chr4 26454464 26463866 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1551 - - gmx:100789150 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1551 4 26454464 26463866 Ssu4g1551 4 26454464 26463866 ECH