Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1536 ATGAGAAGACATTGTAGGATTTGGTGGCCAAAGCAACTTTTATCAAATCAAGAATCATCCTCCAGTATTTTACTGGGGTGGTTTGTTTCCTGCTCACCATCATCCCTTGACATTATTGTAGCCTTTACTTGCAGTGAAGTCTTGCTTTCTAGTTCTTGTCCTGGCATTGAGGGGATCATTCATGACACATGTGGGAGCATGCCTTCATTTCTTGAGGATAAGTCCAAGTTCTCTGTACTTGGTCTGTGTGTCAGTGACCCTACTACTAGTAATAGTTTGATGAATGAGGCGGAAGACGGCAAAAAGAAGTTCTCTGAGTATGGCAATGCTTTGGAAGAGGGAAGTGCAGATAGAAAAAATAACTGTATGAGTTGCTGTTGCTTTCAGTTAGATGgttcattgaggaaaagtagCCAATATGTTCTTGGAAAAAGTAATTGGGTCCTGCTCATGTTTGATTCTCCTGAACAGAATGATGTAGGAATACACGGGCTTCCAAAATTGCATCACATTCATTGGAATGGAATAACTGTGTCGCAATATGATGTTCACGTTATAATTTATGGAACACCCTCTTATGGTGCTCATCATTTCTCATCATGTCATTCGGGTTCAAATGAGGAAGCTGAAGCTTCCATTAAAAATCCTAAGTGGGTCAATGAGCTTCATAAAAAGCAGCAATTTATTGAATTGGATACAGTTATTCTGGCAATTAATTGCGCAGCTGCTGCTAAAAGAATTTTTGAGACACACCTGGTCCCAAGAAGATCCTTGAGCCAGCTCTCCATATTTCCCATGCTTGTTGTTGTCATAGGGCAtctattttccaaatttttggCTTCATTCTCCACTGTGCTCTATATTGTTCTTCAGTTTTTCCAAAGGcattttaattatgaatcaGAATCATTGATGTATGTGACATCAGCAAAGGTATTCATGAAGACTGCTTGGATAAATATGCAAATCCGTTGTTGTCAGATATTATATTGGCCAATCTTTCTTCAGGAGAATGACCTCagGTCACAATCATGTGTTGAATATGTAGAGAAGGTTGCAATGCGTAGGCATTCTATGTGGTCAACTTTGCTTGTTGATATTCTCCTGGGAAACGTGGTTGGCTGGGCATTATTATATCATGCAGAATCCATTTACCTTTTAGTTTTGAACTTTATGCATGGGTTTTCCACATTTTTGCGCTCTGGCTGTGTTTGGTTGATGGGAAACCCTGCAGGCTTCAAATTGAATGCTGAGCTGGCTGGAGTACTTGGCATGGTCTCTTTGAATGCAGTCCAGATATGGTCAACGCTCTGGATCTTTGTGGGTTTCATcttcaattatattattcaagGGCTTTCTGTTTTGGGAATCCTTTGTGGATTCACTGTACCTGCTGCGTTGATCATAGACATGATTGCACTGGCAACTTTACACGTTTCAACTCTTCATTGGTtcatttcatttgtatattcaTCACAGATACAGGCATTAGCAGCCTTGTGGCGGCTTTTCAGGGGTCGTAAATGGAATCCTCTCCGGCAGAGGTTGGATAGCTTTGACTATACTGTGAAGCAACATATTGTTGGATCTCTTCTATTTACGCCACTTTTACTTCTTTTACCAACTACTTccgttttttatatattctttagtATCGTGGACACAACCATTAACCTTGTCTGTCTACTGATTGAAGTCACTATTTCGGTAATTCATGCTACCCCCTATACCAAAATATTTCTTTGGTTGGTGAGACCAGGAAGATTCCCTTCTGGAATATGGCTTGAAATTATTGGTTGTCAGAGTAATAGTACTATTTCTCCAAGTACTGATTTTGCTGATGAAATGACCTCATCCGAGGAGTCGTTGCATCTAAAGGATTTCAATAGAGAAAAATCTAGTATTCTAGTTTCAGTTCTGCACAGCAACTACTTGAGCATAGGAAAAATTATCTTGCCTCActacaaaaatgtatttttgggaGTTTCTGGGTCATCCATCTCCACAGTGGCTTATGGAATCCTCATTGGGCAAAGAATGCCATCTATGCGTGGCACCCTTCTACCTTCACCAATGCCATGGACGTCCCTGTCCTACAAAGAGTATTGGCGACTTTGTCATGATTCACTTATTGCATGCTTCAGATGA 2148 0.3841 MRRHCRIWWPKQLLSNQESSSSILLGWFVSCSPSSLDIIVAFTCSEVLLSSSCPGIEGIIHDTCGSMPSFLEDKSKFSVLGLCVSDPTTSNSLMNEAEDGKKKFSEYGNALEEGSADRKNNCMSCCCFQLDGSLRKSSQYVLGKSNWVLLMFDSPEQNDVGIHGLPKLHHIHWNGITVSQYDVHVIIYGTPSYGAHHFSSCHSGSNEEAEASIKNPKWVNELHKKQQFIELDTVILAINCAAAAKRIFETHLVPRRSLSQLSIFPMLVVVIGHLFSKFLASFSTVLYIVLQFFQRHFNYESESLMYVTSAKVFMKTAWINMQIRCCQILYWPIFLQENDLRSQSCVEYVEKVAMRRHSMWSTLLVDILLGNVVGWALLYHAESIYLLVLNFMHGFSTFLRSGCVWLMGNPAGFKLNAELAGVLGMVSLNAVQIWSTLWIFVGFIFNYIIQGLSVLGILCGFTVPAALIIDMIALATLHVSTLHWFISFVYSSQIQALAALWRLFRGRKWNPLRQRLDSFDYTVKQHIVGSLLFTPLLLLLPTTSVFYIFFSIVDTTINLVCLLIEVTISVIHATPYTKIFLWLVRPGRFPSGIWLEIIGCQSNSTISPSTDFADEMTSSEESLHLKDFNREKSSILVSVLHSNYLSIGKIILPHYKNVFLGVSGSSISTVAYGILIGQRMPSMRGTLLPSPMPWTSLSYKEYWRLCHDSLIACFR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1536 715 Pfam N-acetylglucosaminyl transferase component (Gpi1) 320 590 IPR007720 GO:0006506|GO:0016021
Ssu4g1536 715 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Ssu4g1536 715 PANTHER N-ACETYLGLUCOSAMINYL TRANSFERASE COMPONENT FAMILY PROTEIN / GPI1 FAMILY PROTEIN 1 714 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1536 K03860 - gmx:100805383 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1536 4 26117005 26124619 Ssu4g1536 4 26117005 26124619 ECH