Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1535 ATGGCACTAGTCTCTGGAGGAAGATCAACACTGAACCCGAATGCCCCTCTTTACATTCCAGCTGCGTTCCGCCAAGTGGAGGATTTTTCCCCTGAATGGTGGCAGCTGGTGACAACTCTGACATGGTACCATGACTACTGGCTCAGCCAGCAACAAGATGATGGAGCCTTTTATGGCAACGTTGGTGAGTATTGGTTTGATGGCAATGATGTGGTTGATTTGCTTCCTGATTCGTTTGATCTTGATGCTGGTGAAGATCTTTCTGTTTTGGAAGCTCAGCTTGAAGAGTTTATTCGATCTTCTGAAACCCAAGAAGAAACTGGACCCAAAGTAACTGCATGA 342 0.462 MALVSGGRSTLNPNAPLYIPAAFRQVEDFSPEWWQLVTTLTWYHDYWLSQQQDDGAFYGNVGEYWFDGNDVVDLLPDSFDLDAGEDLSVLEAQLEEFIRSSETQEETGPKVTA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1535 113 PANTHER OS05G0344200 PROTEIN 1 106 IPR040414 -
Ssu4g1535 113 PANTHER PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1535 Ssu-Chr4 26094131 26094606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1535 - - pvu:PHAVU_001G127900g 199.519