Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1530 ATGGCGGGCGGGGTGACCGACCCCGTCACCCGCTGGTCACCCGATCAGGACCAGTTCCCAGGCATGGCCAATTCCCCTCCCTCACCCCGCTCCCACTCCGATTGCGCCAACCCCCTCGCCCAATCGCAGCACCCTTCATTCCCCTACTTCCGCGAATGGAACTTCGATTACTCCTCACACCTCTCTCCCAAGATATGTATCACGACGAGTACTTCGGCGGGGTTGGAGCAGACGCTGCCGTGGATCTTCTATCACAAGGTTATCGGGGTCTCGAGTTTTCTCCTCTTCGTGGAAGGGAAGGCCGCGTCGCCTAATGTGACTAGGGTTTTAGAGAGCATTCCCGGGGTGAAGGTTATATATAGAACGAGGGAGTTGGAAGAGCAGCAAGCTAAAAGCCGAATATGGAATGAGACTTGGTTGGCAAGCTTCTTCTACAAACCATGTAACTATGAGTTGTTTGTGAAGCAATCTTTGAACATGGAAATGGCTATTGTCATGGCAAGGgATTCTGGAATGGATTGGATCATCCATCTGGACACTGATGAGCTGATGCATCCAGCAGGAACACAAGAGTACTCTTTAAGACAGTTGTTAGCTGATGTGCCTGGAAATGTTGATATGgttatttttccaaattatGAAAGCAGTGTGGAGCGAGATGATATCAAGGAGCCTTTCAGTGAGGTATCAATGTTCAAGAAGAACTATGACCATCTTCCAAAGGATGTATATTTTGGAAATTACAAAGAAGCAACTCGCGGCAATCCAAACTATTTTCTTACCTATGGAAATGGGAAATCAGCTGCCAGGATTCAGGATCATCTCCGTCCTAATGGTGCCCACAGATGGCACAACTATATGAAGACACCTAACGAGATAAAATTGGAAGAAGCTGCTGTTCTGCATTACACTTACACCAAATTTTCTGATTTGACTTCAAGACGTGATCGGTGTGGCTGCAAGCCTACCAAAGAAGATGTTAAAAGATGCTTCATGTTGGATTTTGACAGATCTGCATTCATAATTGCTTCAACTGCAACTGAGGAAGAAATGCTTCAATGgTATCGTGAACGCATTGTGTGGACCGACAAAGCACTCAACATGAAACTTATGAGGAAAGGCATCTTGACTCGTATTTATGCTCCCATGGTTATTATTCAAAGTTTGAGGGAATCTGGGGTTTTTAGCTCTGTAATTTCAAAAGCTGCTCAAATGAagttatcaaaagaaaattttttaaaatctgttgAGAGTAGCAATTCAACTAGGAATTCCAGATCTGAAATGATATCTTCTAGAAAAATTGATGCCGGTGGATTATCCCAAGCAACTGCAAGAAGAATTTTGGAAGTTATAGATGACTCACTCCCTTCTGCAATCCCACCGTTATCTCCGCCCAGCCACGATCATGCTGACCTTATTACATCTTAA 1431 0.4389 MAGGVTDPVTRWSPDQDQFPGMANSPPSPRSHSDCANPLAQSQHPSFPYFREWNFDYSSHLSPKICITTSTSAGLEQTLPWIFYHKVIGVSSFLLFVEGKAASPNVTRVLESIPGVKVIYRTRELEEQQAKSRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMARDSGMDWIIHLDTDELMHPAGTQEYSLRQLLADVPGNVDMVIFPNYESSVERDDIKEPFSEVSMFKKNYDHLPKDVYFGNYKEATRGNPNYFLTYGNGKSAARIQDHLRPNGAHRWHNYMKTPNEIKLEEAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRSAFIIASTATEEEMLQWYRERIVWTDKALNMKLMRKGILTRIYAPMVIIQSLRESGVFSSVISKAAQMKLSKENFLKSVESSNSTRNSRSEMISSRKIDAGGLSQATARRILEVIDDSLPSAIPPLSPPSHDHADLITS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1530 476 MobiDBLite consensus disorder prediction 1 40 - -
Ssu4g1530 476 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 3 473 - -
Ssu4g1530 476 MobiDBLite consensus disorder prediction 11 40 - -
Ssu4g1530 476 PANTHER GLYCOSYLTRANSFERASE-LIKE KOBITO 1 3 473 IPR044224 GO:0009737|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1530 Ssu-Chr4 26039776 26045466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1530 - - aprc:113861500 887.1