Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1519 ATGACTCTCCCCACCAACCCCAACTCCTTCTCTTTGGTCATCCTAGTGCTCATTCTCTATTCCTCTTCCTTCCTCGGATCAGCTTCTGATTCTAAACCTGAAGATGAATATACCTACGCTGAAGGAACTAGCAAAGGGCCAGAGAATTGGTGGCGTATCAACCCTAAATGGAAAGTATGTGGGAATGGAAAACAACAATCTCCCATTGATCTCCTAGAAAAAAGGGTGCAGGAGCTTCCTCAATTGGGTAAACTTGAAAAAGATTACAAACCAGCTCCTGCTGTCCTAAAGAATAGGGGTCATGACATCATGCTGCAATGGAAGGGGTATGCAGGCCATCTTAACATAAATGGAACTTACTACAAACTGATTCAATGTCATTGGCATACACCTTCAGAGCACACGTTGAATGGAAAAAAGTTTGACTTGGAACTGCATGCAGTCCATCAAAACTCTAAAGGAGAGACTGCTGTTATTGGAATATGGTATAAAATTGGCCATCCAGATCACTTGCTTTCGAAGCTGCTCAACGTTATAAAATCAATTGGCGACAAGGACATATATTTAGGAGTAATCAACCCAGGAGACATCAAGTTTGGAAGCAGAAAGTATTACAGATATGTTGGTTCTCTTACAACTCCACCATGCACTGAAGGTGTTGTTTGGACAATAGTGAAGAAGGTGAGGACAGTCTCAAGGGAGCAGTTGAGAGCCTTGAAAGGAGCTGTTCACCATGGATACGAGGAAAATGCAAGGCCAACGCAGGAACTTCATGGAAGACAAGTTTGGTTATATACTCCTAAGGAGAATaaacatactaaaatatttgCATAA 834 0.4149 MTLPTNPNSFSLVILVLILYSSSFLGSASDSKPEDEYTYAEGTSKGPENWWRINPKWKVCGNGKQQSPIDLLEKRVQELPQLGKLEKDYKPAPAVLKNRGHDIMLQWKGYAGHLNINGTYYKLIQCHWHTPSEHTLNGKKFDLELHAVHQNSKGETAVIGIWYKIGHPDHLLSKLLNVIKSIGDKDIYLGVINPGDIKFGSRKYYRYVGSLTTPPCTEGVVWTIVKKVRTVSREQLRALKGAVHHGYEENARPTQELHGRQVWLYTPKENKHTKIFA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1519 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 35 266 IPR001148 -
Ssu4g1519 277 ProSitePatterns Alpha-carbonic anhydrases signature. 132 148 IPR018338 GO:0004089|GO:0008270
Ssu4g1519 277 SUPERFAMILY Carbonic anhydrase 37 263 IPR036398 -
Ssu4g1519 277 Pfam Eukaryotic-type carbonic anhydrase 46 264 IPR001148 -
Ssu4g1519 277 Gene3D Alpha carbonic anhydrase 34 275 IPR036398 -
Ssu4g1519 277 PANTHER CARBONIC ANHYDRASE 13 268 IPR023561 GO:0004089|GO:0008270
Ssu4g1519 277 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 13 268 - -
Ssu4g1519 277 SMART Carb_anhydrase_2a 39 266 IPR001148 -
Ssu4g1519 277 CDD alpha_CA_prokaryotic_like 46 264 IPR041891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1519 Ssu-Chr4 25776836 25780598 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1519 K01674 - gmx:100781864 435.647