Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1516 ATGAACCGGAAGATTATTACTAGAAGGGCAGTGCAACTTGACAAGCACGAAACTGAAGGTCACGCTATGGTTCTTTATGACAGCAAATTTTCTgaattacaaaagaaaagaaaactttcaAAGTTGCCGATCACTGTGGACACACAAAATTCGACTGTTAACTTGGAAAACAGAAGCCAGGTAGATTTTCATACTAGCAAGCCGCATTCCTTAGTGGATTCCCTTAATGAGACCTCATCTTCGCTGCCTGTTAGCTTGAGTAGCTTGACATTGACAAATTTGAGGGCCATGGCAAAGGAACACAATGTAAGTAAGTACTATAAGCTTCGAAAAGGAGCTTTGGTTGAACAGTTAATTCAACGACTCAGTAGCTGTTGA 378 0.3862 MNRKIITRRAVQLDKHETEGHAMVLYDSKFSELQKKRKLSKLPITVDTQNSTVNLENRSQVDFHTSKPHSLVDSLNETSSSLPVSLSSLTLTNLRAMAKEHNVSKYYKLRKGALVEQLIQRLSSC 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1516 125 SMART Rho_N_2_a 85 124 IPR011112 GO:0006353
Ssu4g1516 125 Pfam Rho termination factor, N-terminal domain 86 122 IPR011112 GO:0006353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1516 - - aprc:113861911 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1516 4 25727990 25728367 Ssu4g1516 4 25727990 25728367 ECH