Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1514 ATGAGCACACATGGTTCTTACAGCATGAGATCCAAAGCCACCTTTGAAAATGAAGCCAAGGCCACAGTGAAAGAGAGTGGGGGAGGGGGTGGAGGCAAGAGTGGGAAGATGATGTCCTCCAACAGCAAGGAGAATCTGTTCATATGTTTTCTGGTGGCACTCTGGTACTCTTCAAACATTGGTGTGATCCTTCTGAACAAGTACCTGCTTTCAAACTATGGCTTCAAGTTCCCCATCTTCCTCACAATGTGCCACATGTCAGCCTGTGCTGTTCTCAGCTATGTCTCCATTGTGTTCTTCAAGGTGGTGCCTCAGCAGATGATCAAATCAAGGTCCCAGTTCATGAAGATTGCAACTTTGAGCCTTGTGTTCTGTGCATCTGTGGTGGGTGGCAACATCTCCCTCAGGTACCTGGCTGTGTCCTTCAACCAGGCGGTGGGGGCAACCACACCCTTCTTCACTGCTGTCTTTGCCTATTTGGCTACCCTTAAGAGAGAGGCTTGGGTTACCTATGCTGCCCTTGTTCCCGTTGTTGCTGGGGTTGTCATTGCAAGTGGGGGCGAGCCGGGGTTTCACTTATTTGGATTCATTATGTGCTTAAGTGCAACCGCCGCAAGAGCTTTCAAGTCTGTCCTTCAAGGCATTTTACTTTCTTCTGAAGGGGAAAAGTTGAACTCAATGAATTTGCTCCTGTATATGTCTCCAATTGCAGTCCTAGTTTTGTTGCCTGCAGCACTTATCATGGAGCCCAATGTCGTAGATGTCACATTGTCGCTTGCAAAGGACCATAAATCTATGTGGCTACTTCTTATTCTTAACTCAGTCACAGCATATGCAGCAAACTTAACAAACTTCTTGGTGACTAAACATACTAGTGCTCTGACACTCCAGGTATTAGGTAATGCGAAAGGTGCAGTAGCTGTTGTTATCTCAATACTTCTATTCAGAAACCCCGTCACTGTTGTTGGCATGGCTGGCTATACAGTTACCGTAATGGGAGTAGCTGCATATGGAGAAACAAAAAGGAGGTTTAGATGA 1038 0.4644 MSTHGSYSMRSKATFENEAKATVKESGGGGGGKSGKMMSSNSKENLFICFLVALWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYVSIVFFKVVPQQMIKSRSQFMKIATLSLVFCASVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYAALVPVVAGVVIASGGEPGFHLFGFIMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAVLVLLPAALIMEPNVVDVTLSLAKDHKSMWLLLILNSVTAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVVGMAGYTVTVMGVAAYGETKRRFR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1514 345 Pfam Triose-phosphate Transporter family 48 337 IPR004853 -
Ssu4g1514 345 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 37 344 - -
Ssu4g1514 345 PANTHER SOLUTE CARRIER FAMILY 35 37 344 - -
Ssu4g1514 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1514 Ssu-Chr4 25692027 25696947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1514 37 345 Organic Solute Cotransporters AT5G04160 81.553 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1514 - - gmx:100782949 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1514 4 25692027 25696947 Ssu4g1514 4 25692027 25696947 ECH