Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1512 ATGAACAGGTTACAGAGACAGCGCCTCCGAAGATCACACCTGATTGGGAAAAGAATGAGCCATAGGACGGAGTTTTTGGCAAGGATTAGAGAGCTGAAGAAGCGTGTCAGGCATCTTCAAAATCTCTGTCACAACCAACAAAAACATCTTCAAGATCTCGAACTGCTCAAGTGCTTCAAATCCGAGATTAAATTTGAGCTTTCTTCTAATCACTTTCAGAATGCTCAAGGTGGTTCCTTAGGGGACTTTGTCGTGGACTCGGACTCACCCAATTCCAAAGATGTGGTTTTGCGAAGAAAATTCGATTCGGGTGAGGAAGTTGCAGTTTCTGCTATTCTGGGTCCTCCTAATTATGAGAAAGACCTTGTTTTTGCAAGAGATGCTTTTATGAAAGTATGTGTGAAAAAGCCAGCATTGAGTTGCATCTTGCAATTTGACTGTGAAGTTCGTGAAGAAACTGATAAGGGCTCTGATTTTGACATCTACAATGCTTATTATCTCAGATCACCTACATGTCTCAGCCCTTCCATTTACAGAGGCCCCTTATTCAGCACATTGGACAGTGAGTTGCAACATGCTCTCAGGGAATACCTGATAGCCAAGGGCATTGGGGTAAGCCTGACCAATTTCCTTCTCCACTACCTACACAAAAGAGAGCAAGAGCAGTATGTGAACTGGTTGAAGAAAGGTGAAGCTGCATTTGTGGCAAAAGAAGGCTCATTGAAGCAATCTTCAGAGACACATTCTGCTTAG 753 0.4316 MNRLQRQRLRRSHLIGKRMSHRTEFLARIRELKKRVRHLQNLCHNQQKHLQDLELLKCFKSEIKFELSSNHFQNAQGGSLGDFVVDSDSPNSKDVVLRRKFDSGEEVAVSAILGPPNYEKDLVFARDAFMKVCVKKPALSCILQFDCEVREETDKGSDFDIYNAYYLRSPTCLSPSIYRGPLFSTLDSELQHALREYLIAKGIGVSLTNFLLHYLHKREQEQYVNWLKKGEAAFVAKEGSLKQSSETHSA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1512 250 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 52 229 IPR036561 -
Ssu4g1512 250 Gene3D Mitochondrial glycoprotein 50 235 IPR036561 -
Ssu4g1512 250 PANTHER COMPLEMENT COMPONENT 1 32 235 IPR003428 GO:0005759
Ssu4g1512 250 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 32 235 - -
Ssu4g1512 250 Coils Coil 22 49 - -
Ssu4g1512 250 Pfam Mitochondrial glycoprotein 131 229 IPR003428 GO:0005759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1512 K15414 - gmx:100799012 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1512 4 25658585 25660699 Ssu4g1512 4 25658585 25660699 ECH