Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1509 ATGCCTAACATGCCATACCCACTTGCATTGCACAGAGTTACCTACCTCTGTGTTACGCCACAACCCCTCAATGGCTTCCAGCTACGAAAGTTCACCCATGGCTTCGAGGTACAGAAGCCACGACAATGGGATGTTCCAGCACCGAACCcaagtggtggtggtggtggtgccttTCCCAGCACAAGGGCACCTGAACCAGCTCCTCCACCTGTCCCGCCTCATCTCGGCGCACAACATCCCCGTCCACTTCGTGGGCTCCCGGACCCACAACCGCCAAGCGGTGGTCCGCGCCCAGGGCTGGGACCCAGACTCCGTCTCCAACATCCACATTCACGACTTCACCGTCCCGTCCCTCGCCTCCCCGGTCCCCAACCCCGACGCCGGAACAAGGTTCCCTCTCACCTCTTGCCCTCCTTCGAGGCTTCCACGACTCTCCGGGAGCCCGTGTTCGCGCTCCTGCAGTCCCTTTCCTCCGTCGCCAGAAGGGTGGTCGTCATCCACGACTCCCTCATGGCGTCCGTGGTGCAAGACGCCGTCCACGTGTCCAATTGCGAGAGCTACACTTTCCACAGCGTCTCCGCCTTCACCATGTTCTTGTACTTCTGGGACGCAATGGGGAGGCCCCCCGTGGAAATGTCCCACATCCCCGAGGTTCCCTCCCTCGAAGGGTGCTTCACCGCCCGGTTCATGGACTTCATCGCTTCGCAGTACGAGTTCCACAAGTTCAGTAAAGGGACTATATACAACACCACGAGGGCAATCGAGAGCCCTTACATGGAGCTAATAGAGAGGACCATTAGTAGCAAGACCCACTGGGCCTTGGGGCCCTTCAACCCTTTGTCCATTGAGAGGGGAGTCTACACAAGGCAGCACTTTAGTGTTGAGTGGCTTGACAAGCAAGAGGCGAGGTCAGTGATGTATGTGTCCTTTGGGACAACAACATGCTTCTCTGAGGAGCAAATCAAGGAGCTTGCAAGTGGGTTGGAGCAAAGCAAGCAGAGGTTCATATGGGTGGCGAGGGATGCTGACAAGGGAGATGTGTTCAATGAGGACCGGGTGAGGAGTAGTGCTGAGCTTCCAAAGGGGTTTGAAGAGAGAGTGAAAGGTGTTGGGTTGGTTGTCAGAGACTGGGCACCCCAATTGGAGATTCTGAGCCACAGCTCAACTGGGGGGTTTATGAGTCACTGTGGATGGAACTCTTGCATGGAGAGCATCACCATGGGGGTGCCTATAGCAGCCTGGCCTGTGCACTCTGACCAGCCGAGGAACAGAGTTTTGGTCACCGAGGTGCTCAAGGTCGGGCTGGTTGTCAAGGACTGGGACCACAGGGATGAGTTGGTGACAGCATCGGATGTTGAGATTGCCGTAAAGAAGTTGATGGCAACAAAGGAAGGTGATGAGATGAGACAAAGGGCGACGAACCTCAAAAACGCGATTCTCAGGTCCCGAGATGAAGGGGGTGTTTCTCGCGTGGAATTGGATGATTTCATCGCACACGTCACTAGATAG 1509 0.552 MPNMPYPLALHRVTYLCVTPQPLNGFQLRKFTHGFEVQKPRQWDVPAPNPSGGGGGAFPSTRAPEPAPPPVPPHLGAQHPRPLRGLPDPQPPSGGPRPGLGPRLRLQHPHSRLHRPVPRLPGPQPRRRNKVPSHLLPSFEASTTLREPVFALLQSLSSVARRVVVIHDSLMASVVQDAVHVSNCESYTFHSVSAFTMFLYFWDAMGRPPVEMSHIPEVPSLEGCFTARFMDFIASQYEFHKFSKGTIYNTTRAIESPYMELIERTISSKTHWALGPFNPLSIERGVYTRQHFSVEWLDKQEARSVMYVSFGTTTCFSEEQIKELASGLEQSKQRFIWVARDADKGDVFNEDRVRSSAELPKGFEERVKGVGLVVRDWAPQLEILSHSSTGGFMSHCGWNSCMESITMGVPIAAWPVHSDQPRNRVLVTEVLKVGLVVKDWDHRDELVTASDVEIAVKKLMATKEGDEMRQRATNLKNAILRSRDEGGVSRVELDDFIAHVTR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1509 502 PANTHER GLYCOSYLTRANSFERASE 117 502 - -
Ssu4g1509 502 MobiDBLite consensus disorder prediction 62 77 - -
Ssu4g1509 502 MobiDBLite consensus disorder prediction 40 131 - -
Ssu4g1509 502 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 123 502 - -
Ssu4g1509 502 CDD GT1_Gtf-like 114 490 IPR002213 GO:0008194
Ssu4g1509 502 ProSitePatterns UDP-glycosyltransferases signature. 377 420 IPR035595 -
Ssu4g1509 502 Gene3D Glycogen Phosphorylase B; 291 484 - -
Ssu4g1509 502 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 301 463 IPR002213 GO:0008194
Ssu4g1509 502 Gene3D Glycogen Phosphorylase B; 114 489 - -
Ssu4g1509 502 MobiDBLite consensus disorder prediction 84 98 - -
Ssu4g1509 502 PANTHER GLYCOSYLTRANSFERASE 117 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1509 Ssu-Chr4 25642080 25643588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1509 188 501 Glycosyltransferase AT2G15490 33.918 4.92e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1509 K13495 K13492 gmx:100783479 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1509 4 25642080 25643588 Ssu4g1509 4 25642080 25643588 ECH