Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1506 ATGGTCCGCTATCACCGCTACCATCAACCCAGAAAGAGTGCCACAGAGTCCATCAAAGATGAAGAGTCACAGAACCTTGTGTTGGATTGCTCAACCTCTGCTTACTACAAGAGAACCAGGCCCAAGTTGTTGTCTTTCCTCCTCCTCATCACCTTTCTCTCTTGCTGCTATGTCTTCGCACCTCTTTTCCTTGGCTCTTCTTTCCCTTTATCTCTCTTATACTCTCCTGCAACTGAAAACGATGTGAACCGAGATGGGGTTGGTGTAAATGATTCTACATGCTCTTCAGTTTCTGCTGGAACTATATGTTGTGATAGAAGTGGTTATCGTTCCGATGTCTGTGTGATGAAAGGTGATATAAGAACACACTCTACTTCCTCTTCAGTCTTTCTATACAATTCAAGGAGCACCAGTAATGTTTCTAGAAATATTGAAGAGGAACTCCAACATGAAAAGATCAAGCCCTATACTCGAAAATGGGAGACAAGTGTTATGGACACCATTGATGAATTAAACCTCGTCTCAAAGAAAGTGAATTTGGGTAGTGTTGGTAGTTGTGATGTCCAACATGATGTTCCAGCAGTGTTTTTCTCTAATGGGGGCTATACTGGCAATGCTTATCATGAATTGAATGACGGAATTATACCTTTATACATTACTTCACAGCATTTCAACAAGAAGGTTGTGTTTGTGATTCTTGAGTATCATAGTTGGTGGATCATGAAGTATGGGGACATTCTTTCTCGTCTATCAGATTTTCCAGCAATTGATTTTAGAGGAGACAATAGGACTCATTGCTTCCCAGAAGCCATAGTTGGTCTCAGAATCCATGATGAGCTAACTGTGGATTCTGCATTGATGAGGGGTAACAAGAGCATTACTGATTTTAGAAACCTTTTGGATCAAGCTTATTGGCCTAGGATTAGGGGGCTGATTCAAGATGAGGAAAGGAAGGCAcaagagaaattgagagaacAAGTCTCTTCATCTCCATTATCAGAAACCTCACAACAACAGTATATTAGGCAACAGGTGCAAGAAAATCCAATGAAGAAACCTAAGTTGGTTATTCTCTCTAGAAGTGGGTCAAGAGCTATAACTAATGAGAATTTGCTGGTGGAGATGGCAAAGGAAATTGGGTTTTTGGTGCAAGTTTTAAAACCTGACAGAACAACAGAATTGGCAAAGATTTATAGGAATCTTAATGCAAGTGATGTCATGATTGGTGTTCATGGAGCAGCTATGACACATTTTCTGTTCCTAAGACCTGGCTCTGTGTTTATTCAAGTGGTTCCTCTTGGTACTGCATGGGCAGCAGAAACATATTATGGGGAACCTGCAAGGAAGCTTGGCTTGAAATACATTGGCTATGAAATTCATCCTAGAGAGAGCTCTTTGTATGggaaatatgataaaaatgatcCTATTCTAAGAGACCCTACAAGCATTAATAAGAAGGGGTGGGAATACACAAAGAAGATCTATCTTGACAGCCAAAAAGTCATATTAGACCTCAGAAGATTCAGAAAAAGGCTACATCGAGCTTATGAGTATACACTCTCCAAATCAAAACTGAGTCTCCAACACCAACCAATGTGA 1599 0.3959 MVRYHRYHQPRKSATESIKDEESQNLVLDCSTSAYYKRTRPKLLSFLLLITFLSCCYVFAPLFLGSSFPLSLLYSPATENDVNRDGVGVNDSTCSSVSAGTICCDRSGYRSDVCVMKGDIRTHSTSSSVFLYNSRSTSNVSRNIEEELQHEKIKPYTRKWETSVMDTIDELNLVSKKVNLGSVGSCDVQHDVPAVFFSNGGYTGNAYHELNDGIIPLYITSQHFNKKVVFVILEYHSWWIMKYGDILSRLSDFPAIDFRGDNRTHCFPEAIVGLRIHDELTVDSALMRGNKSITDFRNLLDQAYWPRIRGLIQDEERKAQEKLREQVSSSPLSETSQQQYIRQQVQENPMKKPKLVILSRSGSRAITNENLLVEMAKEIGFLVQVLKPDRTTELAKIYRNLNASDVMIGVHGAAMTHFLFLRPGSVFIQVVPLGTAWAAETYYGEPARKLGLKYIGYEIHPRESSLYGKYDKNDPILRDPTSINKKGWEYTKKIYLDSQKVILDLRRFRKRLHRAYEYTLSKSKLSLQHQPM 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1506 532 PANTHER EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE-LIKE 35 524 - -
Ssu4g1506 532 PANTHER GLYCOSYLTRANSFERASE 35 524 IPR007657 GO:0016757
Ssu4g1506 532 Pfam Glycosyltransferase 61 337 427 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1506 Ssu-Chr4 25571238 25573261 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1506 - - gmx:100800591 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1506 4 25571238 25573261 Ssu4g1506 4 25571238 25573261 ECH