Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1500 ATGGCTGTAAAGGAAGCCTCAACTTCATGGAATTCTCTAATGCATATGACAACAGAAGAGATCAAATTGGAGCTCATAAAGAACTACAAGAAGTCCATACATTCAGCAAATGTAAGGAAAAAAATCAGAGAAATCAAACAGAGTAAAGAACCTTTTGTTGGGAAGACATATGATACCAGCAGGCTGAAGCAGCTATGCACATTGACAAACAGGTCATTCCTAAATATGACCAGAGACATTGGTTACTACTGGTTAAGGATTGCATTCTATATCTTGATATCAGTGAGTGCTGGTATTCTTTACTTTAACATAGGAACAAGTAATGAAGCAATCTTATCTAGAGGCAAGTGTGATGGATTCATCTATGGCTTAATGATCTTCCTGTGTTTAGGTGGCGCACCCTTTTACCTTGAGGAATTGAAGGTCTTCAAACATGAAAGGTTTAGGAAGCATTATGGGGAGGCCATCTTTGTGCTGTCGCATTTCCTCTCGTCATTCCCTTTTGTTCTTGCAATTTCCCTCTCTTCAGGAACAATACTTTACCACATGGTGAACTTTCATTTGGGCTTCTCCCATTACTGCTATTTTTGCATGAACCTATTTTGTTGCATTTCAGTCACAGAAGGCTGCACGTTATTTGCTGCGGCACTTGCACCCGACCTATTGGTAGCCATGGGAACTGCAGCTGGTGTAACTGGCCAGTTCAAGAATGACCTGATTGGTCTTGAATTTGAACCAAAGGTGCTTGGGAATACCAAGATAAAGGGTGAAGAGATACTCCATGTTACATTTGAAATTCGAACAGATTATTCGAAATGGTGGGACTTAGGAGTTCTGGTTTGCTTCTTGATATGTTACAGACTGCtttttttcttggttcttaAGCACAAGGAGAGAGCTTCATCATTATTACACACCAAAAGGACTCTTCTACTAGACATTTTACTCAGAAGACCCTCATTGAAGGACAAATATATTTCTTCCAAGCGACATCAACCCTTGCATCCTTTGTCAGCTCAGGAGGGTCTTTCCTCTCCCATCTCCTAA 1047 0.4011 MAVKEASTSWNSLMHMTTEEIKLELIKNYKKSIHSANVRKKIREIKQSKEPFVGKTYDTSRLKQLCTLTNRSFLNMTRDIGYYWLRIAFYILISVSAGILYFNIGTSNEAILSRGKCDGFIYGLMIFLCLGGAPFYLEELKVFKHERFRKHYGEAIFVLSHFLSSFPFVLAISLSSGTILYHMVNFHLGFSHYCYFCMNLFCCISVTEGCTLFAAALAPDLLVAMGTAAGVTGQFKNDLIGLEFEPKVLGNTKIKGEEILHVTFEIRTDYSKWWDLGVLVCFLICYRLLFFLVLKHKERASSLLHTKRTLLLDILLRRPSLKDKYISSKRHQPLHPLSAQEGLSSPIS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1500 348 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 6 231 - -
Ssu4g1500 348 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 6 231 - -
Ssu4g1500 348 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 228 342 - -
Ssu4g1500 348 Pfam ABC-2 type transporter 64 232 IPR013525 GO:0016020|GO:0140359
Ssu4g1500 348 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 228 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1500 Ssu-Chr4 25457877 25460420 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1500 - K05681 aip:107646291 449.129