Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1481 ATGAGTGGGGTATCTGGTGTTATTTCCCGCCAAGTTTTGCCTGCTTGTGGCGCTCTTTGTTTTTTCTGCCCTTCCCTGAGGGCAAGGTCAAGACAACCTGTCAAGAGGTATAAGAAGCTCATTGCTGACATTTTCCCTCGTAATCAGGAGGAAGGGGCGAATGATAGGAAAATAGGAAAATTATGTGATTATGCTGCCAGAAATCCTTTACGCATCCCAAAGATTGTGCAAGCCCTTGAGCAAAGGTGTTACAAGGAGCTACGAAATGAGAATTTCCGTTCAACCAAAATAGTCATGTGCATTTACAAGAAATTTCTGTTTTCTTGTAAAGAACAAATGCCACTATTTGCAAGTAGCTTGCTAAGTATTATTCACACGCTGCTGGATCAATCACGGCAAGATGAAATGAGAATTATAGGATGTCAAATTCtgtttgattttgtaaataatcAGATTGATGGAAGTTACCTGTTCAACTTGGAAGGTGTTATCCCGAAGCTCTGTCAACTAACTCAAGAAACAGGAGAAGATGAAAAGGCAAGAATTAGTCGTTCAGCTGGTTTGAAAGCCCTATCATCAATGGTTCGGTTTATGGGTGAACACTCTCACATTtctgttgaatttgataatATAGTTTCTGCTGTCTTGGAAAACTATGAAGTTCCTAAGAAAAATTCAGCAAACCCTGATCATGAGGAACAAGGTGCTGAGAATAAGAGGGTCCAACACGTGATGGCCAAGGAGGGTCAAATCTCTCCTTTGCTGGATGTCAAAAGGAGAAACCCTTCCTGGAGTAAAACTGTTAACGATAAAGGCGAAATAAATGTagcaatGGAAGATGATATGAATCCCTCTTTTTGGTCTGGGGTTTGCCTACATAATATGGCCAACTTAGCCAAGGAGGGGACTACCATACGTCGTGTAATGGAATCTTTATTCCGGTACTTTGATAATGGAAACTTATGGTCTATAAACCATGGCCTTGCCTTTTCCGTTTTAAAGGATATACTATTTTTGATGGATGATTCTGGTATACTTACTTTCTTATTTCATCATAAAGTTCTCGTGTCATATAATCTATTGTTAATTACTCTTGCTCTTctgttttctctttcattttcccTCCATCTTTTTGCAGAGAAAAACACACATGTTTTGCTGTCAATGTTAATTAAGCATCTGGATCATAAAATTGTCCTTAAAGAACCCCACATGCAGCTTGACATTGTTGAGGTTACCACTTCACTTGCCCAATATGCAAAGATCCAACCTTCTGTATCAATAGTTGGTGCAGTAAGTGACATGATGAGACATTTGCGGAAGTGCATACACTGTTCCCTAGATGACTCAAATCTGGCCCCTGATGTAATCAATTGgaacaagaatttcagaaaagtTGTGGATAAGTGCCTCGTACAGTTGTCTAATAAGGTTGGAGAAGCAGACCCAATTCTTGATGTTATGGCCATGATgttagagaacatctcaactaTCATAACAACATCTAGAACCACAGTCTACGCTGTCCATCGGACTGCTCAAATTGTAGCCTCCTTACCAAATGTGTCCTATCAGAACAAGGCATTCCCTGAGACCTTGTTTCATCAACTACTCCTGGCTATGGTCCATCCAGATCATGAAACACGAGCGGTAGCTCACCGCATCTTTTCTGTTATTCTTGTGCCAACCTCTGTTTTCCCTTGTTCAAGCTTGTCTGTTTCTGATCCCAAGGCATCAAATGTTCCTCGAACTCTTTCAAGAGCAGGCTCTGTTTACTCTTCTTCAGCAGTCATATTTGAGAAGCTACGACTGGAGAAACGTTCTTCAAGTGAAAAATTAAGTCGATATAACAATGGAAATATTTCTGGAGAGATTGAACCAGTTAATAGCAATGTTGGGatcataaacaaattaaagttaACCCATAGTCGGGTGTCTAGCGTGAATAACCCTCCTCTACAATTGGAACTGGATGAAATTGCTGCAAACAAAGATAATTGGAACTTGGAGGCTGCTGCTCTCAGGCTGAGTAGGCTTCAGATAAATCGATTGTTATCATCAATTTGGGCACAGTCTATATCTCCTGGAAACATGCCTGCAAATTATGAAGCAATTGCTCATACATACACTTTGGTGTTGCTTGTTTCTAGAGCAAAGAATTCTTTTCATGAGGTACTAGTTCGGAGTTTTCAGCTTGCTTTTTCTTTATGGAATATTTCTCTTAAAGAAGGGCCATTGCCACCATCTCGTCGGAGATCACTCTTTACTCTGGCAACTTCAATGATTgtgtttttttcaaaagaatacaACATTGACCGTCTTGTCCATAGTGCCAAGGCAGTGCTTACAGGGAGAAAGGTTGATCCCTACCTTCAGTTAATTGAAGATTACAAGTTGCAAGCTGTCAGCTTTGCACCTGACAATCTAACCATCAACTATGGATCCAAAGAAGACGATGACAGGGCCTTAGACACACTTTCAGAGTTATTGAGTTATATACACCAAACACGGGATCTCTTTGCTTCTGAAATCATCAAGAGCTTGGAAATTTTTGCAAAAGCTGAATTATCATCAATAAGGGAACAGCTGCTAGAAGAATTCGCACCAGATGCTATGTGTGAACTTGGATCTCAATTGACTCTGAATATGGCCGCAAAGGATGCTTCAATAGTTTCAAATATTGATGACGACTTCGTTTTTGAACCATTTGAAagtcaaataaaacataatcgGGGTTTGTCCACCGAGTTCCCTAGTCTTCTGAGTGCTAATCAACTTTTAGAATTAGTTTTGGACACATCTCATCCAGCTGGGAGGACTTCTGTATCAAGTGCATTTAATATGCCATACAAGGATATGGCTGATAAGTGTGAGGTACTTTTGATGGAAAAGCAGAAGATGTCCAGATTGATGAGTACCCAACAGAAGCAAGAATGTTTAGTGGACTCCCTTTCACCGAAACATGgcaatgaattgaaaaatatggGTTCCTCTTCCCATGTGGATTTTCAGAAGGTGGCCAATCCTCCCATTGACGAAAATACTGCTGTGGATTTGTACAAACCAACTTCTGGCCCTCTTCCAATCCTATGTGGAACTGAACATCAGAATCATCCTCACCCTTTCAAACTGCCAGCAGCAAGCCCCTACGATAACTTTCTAAAAGCTGCTGGTTGTTGA 3180 0.3868 MSGVSGVISRQVLPACGALCFFCPSLRARSRQPVKRYKKLIADIFPRNQEEGANDRKIGKLCDYAARNPLRIPKIVQALEQRCYKELRNENFRSTKIVMCIYKKFLFSCKEQMPLFASSLLSIIHTLLDQSRQDEMRIIGCQILFDFVNNQIDGSYLFNLEGVIPKLCQLTQETGEDEKARISRSAGLKALSSMVRFMGEHSHISVEFDNIVSAVLENYEVPKKNSANPDHEEQGAENKRVQHVMAKEGQISPLLDVKRRNPSWSKTVNDKGEINVAMEDDMNPSFWSGVCLHNMANLAKEGTTIRRVMESLFRYFDNGNLWSINHGLAFSVLKDILFLMDDSGILTFLFHHKVLVSYNLLLITLALLFSLSFSLHLFAEKNTHVLLSMLIKHLDHKIVLKEPHMQLDIVEVTTSLAQYAKIQPSVSIVGAVSDMMRHLRKCIHCSLDDSNLAPDVINWNKNFRKVVDKCLVQLSNKVGEADPILDVMAMMLENISTIITTSRTTVYAVHRTAQIVASLPNVSYQNKAFPETLFHQLLLAMVHPDHETRAVAHRIFSVILVPTSVFPCSSLSVSDPKASNVPRTLSRAGSVYSSSAVIFEKLRLEKRSSSEKLSRYNNGNISGEIEPVNSNVGIINKLKLTHSRVSSVNNPPLQLELDEIAANKDNWNLEAAALRLSRLQINRLLSSIWAQSISPGNMPANYEAIAHTYTLVLLVSRAKNSFHEVLVRSFQLAFSLWNISLKEGPLPPSRRRSLFTLATSMIVFFSKEYNIDRLVHSAKAVLTGRKVDPYLQLIEDYKLQAVSFAPDNLTINYGSKEDDDRALDTLSELLSYIHQTRDLFASEIIKSLEIFAKAELSSIREQLLEEFAPDAMCELGSQLTLNMAAKDASIVSNIDDDFVFEPFESQIKHNRGLSTEFPSLLSANQLLELVLDTSHPAGRTSVSSAFNMPYKDMADKCEVLLMEKQKMSRLMSTQQKQECLVDSLSPKHGNELKNMGSSSHVDFQKVANPPIDENTAVDLYKPTSGPLPILCGTEHQNHPHPFKLPAASPYDNFLKAAGC 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1481 1059 PANTHER CYCLIN-LIKE PROTEIN 5 348 - -
Ssu4g1481 1059 PANTHER PUTATIVE, EXPRESSED-RELATED 5 348 - -
Ssu4g1481 1059 SUPERFAMILY ARM repeat 88 560 IPR016024 -
Ssu4g1481 1059 PANTHER CYCLIN-LIKE PROTEIN 380 1059 - -
Ssu4g1481 1059 PANTHER PUTATIVE, EXPRESSED-RELATED 380 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1481 Ssu-Chr4 24749990 24763533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1481 K21842 - gmx:100817296 1763.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1481 4 24749990 24763533 Ssu4g1481 4 24749990 24763533 ECH