Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1473 ATGGACCACTTTCTCTGtGGTGGcaacagtggtggtagtggtggcggtggcagtGACGTTGACGGTGATGGTAGTGGCAATAgcaacggtgatggtggtggcggtgatgaCAGCGGTGGTAATGGTGACGACAaaggtggtggtagtggcagcgGTTATGGTGGTGGAGACAATGGTGATCttataagagCTATAGCAGCACCTGAGATGGCTTCAGCCTCTACAAGAACCCGAATCAAGTGGCAAAAGCTTGAGGAAACAAAGCAGCGAAAATCGATGACAAGGCCATGCGAGTGTGCTACTTCTTCAAGCTCCCAAGAGCAAGGTATTGGGAATGTTGAGGAAGATAACACCAAGGAAGATGTTTGTTCAAGTGGCTGTGCTACACCAAAGGCTAAAAGGTTCAGAATACCAGAAGTGTTAACATGTCCACCAGCTCCAAAGAAGAGAAGGGTAATGCCCAATTGCTCGTCAAATAGATCCCCAATAGCATTTTTTGCTTCACCGGATATAGAGTTGTTCTTCTTTTCTGCACTCAGAAATGTTTCAGCTTGA 555 0.3838 MDHFLCGGNSGGSGGGGSDVDGDGSGNSNGDGGGGDDSGGNGDDKGGGSGSGYGGGDNGDLIRAIAAPEMASASTRTRIKWQKLEETKQRKSMTRPCECATSSSSQEQGIGNVEEDNTKEDVCSSGCATPKAKRFRIPEVLTCPPAPKKRRVMPNCSSNRSPIAFFASPDIELFFFSALRNVSA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1473 184 MobiDBLite consensus disorder prediction 1 123 - -
Ssu4g1473 184 PANTHER CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13 78 179 IPR040389 GO:0032875
Ssu4g1473 184 MobiDBLite consensus disorder prediction 94 112 - -
Ssu4g1473 184 MobiDBLite consensus disorder prediction 79 93 - -
Ssu4g1473 184 PANTHER - 78 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1473 Ssu-Chr4 24560943 24566070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1473 - - aprc:113862156 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1473 4 24560943 24566070 Ssu4g1473 4 24560943 24566070 ECH