Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1469 atggAGGGAGAAGAGGAGTTGCTATGGAAATCGGAGCCCCAACGCGAATCCATCGTCTCCGTCGCGCTCGCACGTGCCATGACTTCTCTCCTCACTGCCCGCCCCAAGAAGCTTCACGACTCTATTTCTCGCCTCTCCTCTCACTCACACTCGCACCCTTCTTCGCTCGCCTCTCTCGAAGACTCGCTCTGGTTCTTCCACAGCTACGTAGCCGACGCTGCAACCAACAACTCTCCCCTCGACCAAGTCCTCCTTCCCATCATCGACAACGCGTTGAAGTCCAAGCACGGTGACCAAGCTATGGTTCTGCTGAACTGGCTCTTCCAGGACGAGCTTCTTTTCCAACCCATTGCCGAGGCTCTCGCTGGCATCGTCACCGGAAGGCACGATCGCTACTTGTTGCTCGGCTGGTGTCTCCTTCTTCGGAATCTTGTTGAGTACGAGAGTTCCGCTCATCAATCCATGCTTGCTGGAATAAGGGAGAGGTATGGTGATTTGTTGAAGATACTCTCCACCTGCCTTCCGGATTTGGCAGGCATTGTCAGTAAAGGAAGCACTTTGCAGGATGGTTTTGAGTTGCCGTCTCGCCTTGGAGTGTCTGCCGCTGATTGTTTTTTGTCCCTTTCGGGAGCATTAACAAAGGCGTCTGAGCTTCAAAGTCAAAGtaagaagttaaaattaaatacaagaaCAAAAGATCAGGCAATTACTTTTGTACAATCTCATACTATTGACAAGAAGGTGAAATCGGATTCAAAATCTTTGTTGATGTCAAAGATTGAAAGGGACTATACTCTGTGGCATCATTTAGATGACATTATTTGTTTGGTGCAAAGACTCCTTTCTTGGAGCAGGAAAAGACGTTTTTTACATGCCAAAGGCTTGGAGCAAGTTCTTAAATGGCTGGAAGAGATAAATGATCACTATGGGTCCTTTCAACATGAGGCAGCATTGAAGACGGATTCTAATGCTTTCAAGACTGGGGATTTACTGCTCTCTTCTTGCTGGAAGCATTATAGCATGCTACTACACCTGGAAGATAAGAAGTTCTCTCAGCAATACAAGGAACTGTTGGACCAGTATTTGTCTGGCATTCAGTATTATATGGACAATCACACTGGTGGTGGCTATACTGACAACAACGATGGTGGGTTGGAGACcagaaagttttttttaaattgtttatgcCTACTGCTAGGACGTCTAGACAGCAAGAGATTTGAAAGCATGGTATCAGAATTCAGGATGAATATCTCAAGCATTCTAGTTCCACAGCTTAATTGCACTGATGAAGATGTGATAGTTGGGGTTGTTTCAATATTCAAGGCTATCATTCTGAGGCCAGATTACTCACAAGAAGATGCACTTACTGACACTAGGAGCAAAGATGATCAGTGCCTTTTGGAAGTTCTAAAGCGCCTTGCTTCTGGAAACATTTCACAGAGAAGAAATGCTATGGATGTTATATCAGAAGTCTTACATATATCATCAAAGTCACAAAATTTAATGCCTTTTTCTGCTTGGCAAGTTATAGCCAACAAATTGCTAGAACGGCTTGGAGATGAAGAAATTATGATTCGAGAGCAGGCATCCAAATTACTTCCAATGATAGACCCTTCATTGTACTTGCCTGCACTGGTTGGTCTTGTCTACTCTTCAGATGAGAGCCTATCATCTGCTAGTGATGCCATCACTGGGTTACTCAAACGTCACAACCAGAGAATTGAAATCATATTCTTGCTTCTTGACTGTCTTAGCAGCACCAGTAAGAGCCTAGACCTTCCACAGTCTACTGGAGATAAAGGGTCAAAGTTGGATACTGATCGAGTACTCAAACTGGTTCCAGTGTGGTCTAAAAGTGTTCAAGACTGGAACTTCTTAATTGGACCACTGGTTGACAAGATGTTTGCAGATCCATCAAATGCAACTATTGTCAAATTCTTGAGTTATATAAGTGAAAATCTGGCAAATGTTGCTGATCTTGTACTGCATCATGTTCTGTTTCATGTTAGAGAACAGAAAGAGATTGATGAAAGTTTCTTATCAAGATGGGAGCAAAGAAACTACACCAGTGATGAGTTTGAAGAAATGCAACGATCTCTGTTTGAGCATCTATGCCCTTTGCTCATAATTAAGATTCTTCCCCTGAAAACTTTCAATGACCTCAATTCATCAATTATGTATGGACAACTCAGTCAACATATAATCCAGGATGCAAGAAGCAGGGACACTGAGATTGATTATGATTGTATCGCTGCTCTCCTTCTAAACAGGGCTTTTTGTGAGTTCGAATTTGAAGATGTTCGGAAGCTTTCTGCTGAGCTGTGTGGACGCATGCATCCAcaaGTTCTCTTCCCATTTCTTTGCTCCATGTTAGAGATGGCTGTTGATTCTAAGAATATACTGAAGATAAAGGCCTGTTTATTCTCAATCTGCACATCTCTTGTGGTCAGAGGCTGGGAGTCACTTTCTCATCCTTCAATGTATGCAATTAGAAAGATGATTGAAACGGTGCTGTTATGGCCTTGTCTGAACACTGATTCAGTTTCTAAAGCACAACATGGATGCATTGATTGTCTAGCACTGATGATATGTGCTGAACTACAAGCTAAGGAATCAATCACCAATTCCATGCCAGACAAAATTAGGGCTGTTGGGAAGAAAGGGAATTCTGTTGTCACCTATGTGATCAATCAGTTCTTTAATGACAAGAATGAACGAACTTCAACTCCCGAGTTTGGGGATGAAAACTCAGAATTGGTGGCTGCAGTTCCTCTCTCTTTCCGACTTTGTATGGGTAATGTTCTCATTAGCACTTGCCAGAAGATATCAGAATCTTGTAAGAAGCCCTTTGCAGCACAAGTTAttccttttctccttcattCTCTTGAGTTTGAAACGAAGTCAGAGATTAGAGCAGCATGCACCCAGGTCCTATTTTCAACCGTCTATCATCTAAGATCTGCAGTTTTTCCTTATGCGTATGACCTTCTCAGAATCGCACTAAAAGCCCTGAGGAAGGAGTCAGAAAAGGAAAGGTTGGCAGGTGCGAAGCTAATAGCATCGCTTATGGCCAGCGAAGATGCGATTTTGGAAAACATATCAGTTGGACTATTAGAAGCGAGGTCTGTACTCTCAACCATATCCTCTTCAGATCCTTCACTTGAGTTACAACAGCTATGCCACAAGTTGCTAGCATGCATATCTTCTCCataa 3216 0.4232 MEGEEELLWKSEPQRESIVSVALARAMTSLLTARPKKLHDSISRLSSHSHSHPSSLASLEDSLWFFHSYVADAATNNSPLDQVLLPIIDNALKSKHGDQAMVLLNWLFQDELLFQPIAEALAGIVTGRHDRYLLLGWCLLLRNLVEYESSAHQSMLAGIRERYGDLLKILSTCLPDLAGIVSKGSTLQDGFELPSRLGVSAADCFLSLSGALTKASELQSQSKKLKLNTRTKDQAITFVQSHTIDKKVKSDSKSLLMSKIERDYTLWHHLDDIICLVQRLLSWSRKRRFLHAKGLEQVLKWLEEINDHYGSFQHEAALKTDSNAFKTGDLLLSSCWKHYSMLLHLEDKKFSQQYKELLDQYLSGIQYYMDNHTGGGYTDNNDGGLETRKFFLNCLCLLLGRLDSKRFESMVSEFRMNISSILVPQLNCTDEDVIVGVVSIFKAIILRPDYSQEDALTDTRSKDDQCLLEVLKRLASGNISQRRNAMDVISEVLHISSKSQNLMPFSAWQVIANKLLERLGDEEIMIREQASKLLPMIDPSLYLPALVGLVYSSDESLSSASDAITGLLKRHNQRIEIIFLLLDCLSSTSKSLDLPQSTGDKGSKLDTDRVLKLVPVWSKSVQDWNFLIGPLVDKMFADPSNATIVKFLSYISENLANVADLVLHHVLFHVREQKEIDESFLSRWEQRNYTSDEFEEMQRSLFEHLCPLLIIKILPLKTFNDLNSSIMYGQLSQHIIQDARSRDTEIDYDCIAALLLNRAFCEFEFEDVRKLSAELCGRMHPQVLFPFLCSMLEMAVDSKNILKIKACLFSICTSLVVRGWESLSHPSMYAIRKMIETVLLWPCLNTDSVSKAQHGCIDCLALMICAELQAKESITNSMPDKIRAVGKKGNSVVTYVINQFFNDKNERTSTPEFGDENSELVAAVPLSFRLCMGNVLISTCQKISESCKKPFAAQVIPFLLHSLEFETKSEIRAACTQVLFSTVYHLRSAVFPYAYDLLRIALKALRKESEKERLAGAKLIASLMASEDAILENISVGLLEARSVLSTISSSDPSLELQQLCHKLLACISSP 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1469 1071 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 1070 - -
Ssu4g1469 1071 Gene3D - 727 1069 IPR011989 -
Ssu4g1469 1071 SUPERFAMILY ARM repeat 382 1071 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1469 - - gmx:100800773 1792.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1469 4 24453136 24468283 Ssu4g1469 4 24453136 24468283 ECH