Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1465 ATGGAGAGAGGGGCCAGTAGTAAGAaaacatcacctctctcttcgcaGCAATTCATCTCTGTTACCACCCCTCTTCTTGATTTGGAAAAGGAAGCTGAGGTATCAAGCACAGGAGTGTCTCAAGAGAGGGTCATAGAGAATGCTGAGAAAGATGAATCCACAGTTGATGACTGTCCCATTGAGCAAGTGAGGCTAACAGTTCCAATCACTGATGACCCTACTCAGCCAGCACTAACATTCCGGACATGGGTTCTGGGGTTGGCATCATGTATGCTCCTTGCCTTTGTGAACCAATTTTTGGGCTACAGAACCAACCCTTTAAAAATCTCTTCAGTCTCAGCGCAGATTATTACCCTCCCACTTGGGAATTTCATGGCTGCAACTCTTCCCACTAAATCAATCCGAGTCCCTTTTATGAAATGGTCTTTTTCATTGAATCCGGGGCCATTCTCTTTGAAGGAACATGTGCTGATCACTATCTTTGCTACCTCCGGATCTAGTGGTGTTTATGCAATCAACATCATTACAATTGTTAAGGCTTTCTATCACAGGAGCATCCATCCAGTAGCAGCTTATTTGTTAGCACTGTCAACCCAAATGCTTGGGTATGGATGGGCTGggatttttagaaaattcctTGTTGACTCCCCTTATATGTGGTGGCCTGAAAACCTTGTGCAGGTGTCTCTATTCAGGGCAtttcatgaaaaagaaaaaaggcctAAAGGAGGAAACACTAGGCTGCAATTCTTTTTCCTAGTCTTTATAGTGAGCTTTGCCTATTACACTGTTCCAGGTTACTTTTTCCAAGCAATATCAACTATTTCCTTTGTTTGCTTGATTTGGAAAGATTCCATCACGGCGCAACGGATTGGTTCAGGCATGAAAGGCCTTGGCATCGGCTCATTTGGCCTTGATTGGAACACTGTTGCAGGCTTCTTAGGCAGTCCTTTGGCTGTACCTGGCTTTGCCATCATCAACATGTTGATTGGATTTGTGCTGTATATTTATGTTGTGATTCCCTTTGCCTACTGGAACAATTTATATGATGCCAAAAAGTTTCCCCTCATTAGTTCTCACACGTTTGACTCTACTGGTGCAACTTATAATGTTACTCGGATTCTAAATACCGAAACTTTTGACATTGATTTGAATAGTTATAACAATTACAGCAAGATCTACCTTAGTATCACATTTGCGTTTGAGTATGGATTGAGCTTTGCAACTCTAACTGCCACTATTTCACACGTTGTCCTCTTCCACGGAGAAACAATTCTTCAGATGTGGAGGAAGACAACAAGTGCACTAAAAGAACAACTTGGAGATGTCCATACAAGAATTATGAAGAAAAACTATGAACAAGTTCCTGAATGGTGGTTTGTTACCATTTTGATTCTTATGGTTATTATGGCCTTGGTTGCTTGCGAAGGCTTTGGCAAGCAACTCCAACTGCCATGGTGGGGAATTTTACTTTCTCTAACAATTGCATTAGTTTTCACCTTGCCAGTTGGGGTGATTCAAGCAACAACAAACATACAAACAGGACTCAACGTGATTGCAGAGTTAATAATTGGGTTCATTTACCCAGGAAAGCCCCTTGCTAATGTAGCCTTCAAAACTTATGGGCATGTCAGCATGGTACAGGCACTTGGGTTTCTTGGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCAAAATCTATGTTCATGGTGCAGCTGGTAGGCACAGTTGTTGCTTCATCTGTCCACTTTGTCACAGCTTGGTGGCTTCTCACATCTATTGAGAACATATGTGATGAAGCATTGTTGCCTAAGGGTAGTCCCTGGACATGCCCTGGTGATGATGTGTTTTATAATGCTTCAATCATATGGGGAGTAGTAGGACCACAGAGAATGTTCACCAAGGATGGTGTTTACCCTGGGATGAATTGGTTTTTCCTCATTGGTCTACTTGCACCCCTTCCAGTGTGGCTGCTTTCTCTCAAATTCCCCAACCACAAGTGGATTCAACTCATCAACATTCCCGTTATCACTGCAGGTGCATCCAACATCCCGCCAGCCAGATCTGTGAATTATATTACTTGGGGAATTGTTGGAATCTTCTTCAATTTCTATGTTTATAGAAAGTTCAAGGCATGGTGGGCTAGACATACTTACATCCTTTCAGCTGCCTTAGATGCTGGAGTTGCTTTCATGGGTGTGGCCCTCTATTTTGCCCTTCAATCTAATGGTATTTTTGGTCCAACCTGGTGGGGTCTTGATGCAGACCACTGCCCTTTGGCCAAATGCCCCACAGCTCCAGGTGTACATGCCAAGGGATGCCCTCTTCTCTGA 2337 0.4215 MERGASSKKTSPLSSQQFISVTTPLLDLEKEAEVSSTGVSQERVIENAEKDESTVDDCPIEQVRLTVPITDDPTQPALTFRTWVLGLASCMLLAFVNQFLGYRTNPLKISSVSAQIITLPLGNFMAATLPTKSIRVPFMKWSFSLNPGPFSLKEHVLITIFATSGSSGVYAINIITIVKAFYHRSIHPVAAYLLALSTQMLGYGWAGIFRKFLVDSPYMWWPENLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFIVSFAYYTVPGYFFQAISTISFVCLIWKDSITAQRIGSGMKGLGIGSFGLDWNTVAGFLGSPLAVPGFAIINMLIGFVLYIYVVIPFAYWNNLYDAKKFPLISSHTFDSTGATYNVTRILNTETFDIDLNSYNNYSKIYLSITFAFEYGLSFATLTATISHVVLFHGETILQMWRKTTSALKEQLGDVHTRIMKKNYEQVPEWWFVTILILMVIMALVACEGFGKQLQLPWWGILLSLTIALVFTLPVGVIQATTNIQTGLNVIAELIIGFIYPGKPLANVAFKTYGHVSMVQALGFLGDFKLGHYMKIPPKSMFMVQLVGTVVASSVHFVTAWWLLTSIENICDEALLPKGSPWTCPGDDVFYNASIIWGVVGPQRMFTKDGVYPGMNWFFLIGLLAPLPVWLLSLKFPNHKWIQLINIPVITAGASNIPPARSVNYITWGIVGIFFNFYVYRKFKAWWARHTYILSAALDAGVAFMGVALYFALQSNGIFGPTWWGLDADHCPLAKCPTAPGVHAKGCPLL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1465 778 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 62 742 IPR004813 GO:0035673
Ssu4g1465 778 PANTHER ISP4 LIKE PROTEIN 10 777 IPR004648 GO:0055085
Ssu4g1465 778 Pfam OPT oligopeptide transporter protein 78 740 IPR004813 GO:0035673
Ssu4g1465 778 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 10 777 - -
Ssu4g1465 778 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 56 743 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1465 Ssu-Chr4 24405179 24407838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1465 42 778 Organic Solute Cotransporters AT4G26590 66.667 0.0 1047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1465 - - gmx:100820498 1481.46