Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1450 ATGAAAGAAATTGAGAACAGAAAAGCTTCAAGGAATAGTCAGACAAAGGGTTCAAGAAGAACCGAAAGGAGAGAGAATAAATTGCATCAAGATAATTCTTCCAAAACATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGGATAGTAGACCAActgcaaataattttataagtgaTTCAAACATGGCCTCAGAGAATTCAGAAACTTATGAAAACTTGGTTATACATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACTTGCCAAGATGAAAGTTAATGAAATGGTTgccaatgaaaacaaaaatgaagtgGCTGATGATCATTCCAGTGATTTGGATAAAGAGCCAAAGGAAGGGAATGAAGAAGTATCAGATACTGAGACAGTAAAGGACTCGGTATCTTCCCAAGGTGATTCTTTCACAAATGAGGATGAGAAAGGAGAAAAGGCTTCAAAAGGTCCTAAAAGCAAGGTTAAAGTGAATCCTTCAGAAAGCAATCGTGGATCAAGGGAAAGATccgataaaaaaacaaataaattgcaATCAAAGGTATCACATAGCAATCAAAAGAACCCTATGAACGCAAATAAAGGGCCCTCCAAAGTTACAAACAAAAATACTTCCTCAACCAGTTCTAAGACTGTGAAAGTTCCTGTAAATGTTTTGTCAGAATCTTCTGAAGGTGTTGATGAAAAACCTGTTCAAGAGGTCAAGGAACTTGATATCATGGATGGATCCTCCAATGGTGCTCACAGCATAGAAAGTCAAGATGAAAATCATGAAACAGTTAATGCTGAAGAAAATGGTGAACACGAGGACGAGGCAGCTGGggaattaaaaattgaagaaatggAATTTCGAATTGAAAAACTTGAAGAGGAACTGAGAGAAGTTGCAGCTCTTGAAGTGTCACTTTATTCTGTTGTACCAGAGCATGGCAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATATATATGCTTGTAAGCATTGGACCCAGAAAAGGAGAGCAATGATTGCCAAGAATACTGTTTCTGGCCTTATTTTGGTTGCAAAGTCTTGTGGTAACGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCATTGTGCTGAGAGAGATAATTTCTCAAGCTTTTGGGAATTCATGTCAAGCTAGTCCCCTTAAAAGGTTGGCTGAGTCAAATGGGGCTGGCAAGAGAAACGATGGGAAGTCTATGGCACTGAAATGGAAAGGTAGCTCCAATGGTAAACCAGGAAATGGTTTTATGCCTCTTATTGAAGATTGGCAAGAGACAGGAACCTTTACATTTGCTTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTATATGCAGTCTCCAGTTGGGAACTCTTCAAATAAATCCATTGGGAGAATGATGGGACCTGCTCTGGGTGATCACAATCAAGGAAACTTTTCTATCAATCTCTGGAAAAACGCTTTCCAAGATGCTTTTCAACGACTCTGTCCTGTTCAAGCTGGAGGACATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTCATGGAACAGTGCATAGCTAGACTAGATGTTGCTATGTTCAATGCTATTCTGCGGGAGTCAGCCCTTGAGATGCCAACTGATCCTATGTCGGACCCTATTGTGGATTCAAAAGTTTTGCCAATTCCAGCTGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCCAGATGGCTTACTGACATGTTTGGCATGGATGCTGAAGATTGTCTGCAAGAAGATCAGGAGAACAGTGAGAATGATGAACAGCATGGTGGAGATGGTGAACCTAAATCTTTTGTTCTCCTTAACGACTTGAGTGACCTTCTGATGCTACCTAAAGACATGCTTATAGATAGAAAAATCAGACAGGAGGTGTGTCCATCCATTAGTCTTTCATTGGTTATCCGGGTTCTATGTAACTTCACTCCGGATGAGTTCTGTCCAGACCCTGTTCCAGGAACTGTCTTGGAGGCCCTGAATGCGGAGACTATTATAGAGCGAAGATTGTCAGCAGAATCTGTACGAAGCTTCCCTTATGTGGCTGCTCCTGTTGTGTATATGCCTCCCTCCTCTGCTAATGTGGCAGAGAAAGTTGCAGAGGCTGGCGGAAAGTCTCACTTGGCAAGGAATGTATCGGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGAGTTAGAGGAACTTGATTCCCCTCTTACATCCATCATCGATAAGCTTCCTTCATCTCCAACAGTCACTGATAGTGGAAAAGCTAGTCACAAAGAGCAAGGGGGCCATCCTACAACAAATGCAAGATATCAACTCCTACGTGAAATTTGGTCCATGTGA 2433 0.4073 MKEIENRKASRNSQTKGSRRTERRENKLHQDNSSKTLNEKGTESKTPQDSRPTANNFISDSNMASENSETYENLVIHYVDDVNRSEEALAKMKVNEMVANENKNEVADDHSSDLDKEPKEGNEEVSDTETVKDSVSSQGDSFTNEDEKGEKASKGPKSKVKVNPSESNRGSRERSDKKTNKLQSKVSHSNQKNPMNANKGPSKVTNKNTSSTSSKTVKVPVNVLSESSEGVDEKPVQEVKELDIMDGSSNGAHSIESQDENHETVNAEENGEHEDEAAGELKIEEMEFRIEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSRLYIYACKHWTQKRRAMIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSCQASPLKRLAESNGAGKRNDGKSMALKWKGSSNGKPGNGFMPLIEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQSPVGNSSNKSIGRMMGPALGDHNQGNFSINLWKNAFQDAFQRLCPVQAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEMPTDPMSDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDAEDCLQEDQENSENDEQHGGDGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEVCPSISLSLVIRVLCNFTPDEFCPDPVPGTVLEALNAETIIERRLSAESVRSFPYVAAPVVYMPPSSANVAEKVAEAGGKSHLARNVSAVQRRGYTSDEELEELDSPLTSIIDKLPSSPTVTDSGKASHKEQGGHPTTNARYQLLREIWSM 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1450 810 MobiDBLite consensus disorder prediction 1 67 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 166 183 - -
Ssu4g1450 810 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 11 809 - -
Ssu4g1450 810 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 809 IPR021827 GO:0005643
Ssu4g1450 810 MobiDBLite consensus disorder prediction 47 67 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 184 223 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 1 46 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 100 277 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 102 130 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 143 157 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 773 799 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 256 277 - -
Ssu4g1450 810 Coils Coil 276 303 - -
Ssu4g1450 810 MobiDBLite consensus disorder prediction 401 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1450 Ssu-Chr4 24136209 24140744 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1450 - - gmx:100804499 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1450 4 24136209 24140744 Ssu4g1450 4 24136209 24140744 ECH