Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1448 ATGGCGCCCAGATGGAAAGGAAAAGATGCAAAAGCTAAAAAGGATGCAGAAGCTGAAGCGCTCAAGGAGCCCATGTCAAAGATTATATCTCAACTTCAGTCTTCTCTAGTGCAATCAGATACTTGTGGATTTCTCTCTGATAGCGGTGCACACTTAGCAGTGGGAGCAGAACAAATTGATCTGCTTGATAAAGCATGCTTTGGTCGACCTGTGAGAACAGTTGAAAAGGACAAACAGTGGTTTCAACTAAGCTTCGAGGAGGCATTCTATCTATGCTATTCCTTGAAATGCCTTAAGATCAATGGCGGCGATACTGGTCCCCAAAATGATGAAGAGCTGTGGCATTACATGAAGTCCCAGAAAGAAACATTCCCTTGTTTCTACAAGGCTTATGCCCACCTTCGAATGAAAAATTGGGTAGTGAGGTCAGGAGCTCAGTATGGTGTAGACTTCATTGTCTATCGTCATCATCCAGCTCGGGTCCATTCCGAGTATGGTGTGCTTGTTTTATCTGATGGGGATGATAAAGATCTAAATGGAAGATTGAGAGTATGGTCTGATGTTCATTGCACAACTCGACTTCTTGGAAGTGTTGCAAAAATCTTATTGGTTTTATATGTCAATAAAAATGGTAACAGTAACGAGTCTCCATTATTTCTGGCAAACTACACCGTTGAAGAGCGCACAATCACCAGATGGAGTCCAGAACAGTGCCGTGAAAAGATGTAG 729 0.4266 MAPRWKGKDAKAKKDAEAEALKEPMSKIISQLQSSLVQSDTCGFLSDSGAHLAVGAEQIDLLDKACFGRPVRTVEKDKQWFQLSFEEAFYLCYSLKCLKINGGDTGPQNDEELWHYMKSQKETFPCFYKAYAHLRMKNWVVRSGAQYGVDFIVYRHHPARVHSEYGVLVLSDGDDKDLNGRLRVWSDVHCTTRLLGSVAKILLVLYVNKNGNSNESPLFLANYTVEERTITRWSPEQCREKM 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1448 242 Gene3D - 123 217 IPR011856 GO:0003676
Ssu4g1448 242 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 1 241 IPR006676 GO:0000213|GO:0006388
Ssu4g1448 242 Pfam tRNA intron endonuclease, N-terminal domain 46 114 IPR006678 GO:0000213|GO:0006388
Ssu4g1448 242 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE 1 241 - -
Ssu4g1448 242 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 123 212 IPR036167 GO:0006388
Ssu4g1448 242 Pfam tRNA intron endonuclease, catalytic C-terminal domain 128 213 IPR006677 GO:0000213|GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1448 K15322 - gmx:100810335 418.698