Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1434 ATGCAGCGTGTATGTTTCCCACCGCACTCTATAAATTTCAACGCTCTCCCACTTGCCGTTTCACATTCACCAAAAATGGAAGCCATGTTTGGATTGTGTTTCCTCACGTTCCTGTTGTTCTCCCCAGTTGCATTCTCGGAGCTGTGCAACCCACAGGACAAGAAAGTGCTGCTCCAAATCAAGAAGGACTTCAACAACCCTTACCTACTAGCCTCGTGGAACCCAGACACCGATTGCTGCAAATGGTACTGCGTCAAGTGCGACCCCAAAACGCACCGCATCAATTCCCTCGTCATATTATCCTCTGTTCCCGAAACTAATTTCTCGGGGCAAATACCACCCTCCGTGGGTGACCTCCCTTACCTGGAGACCCTCGAATTCCACAAGCTCCCTAAACTCACCGGCCCAATCCAGCCCACCATTGCCAAGCTCACTAAACTCAAGGAGCTCTATATTAGCTGGACCAATATCTCCGGCCCAGTACCCGATTTCTTGGCCCAACTCATAAACCTCCAGTTCTTGGACCTTTCCTTTAATAACCTCTCCGGCCCGATACCAAGCTCGCTTTCCCAGTTGCCTCACCTGTTGTCCTTACGCCTGGACTGGAATAGGCTCACAGGCCCAATCCCGGACTCATTTGGGTCCTTCAAGAAGCCAGGCCCAAGCCTTTTACTATCCCACAACCAGCTTTCCGGGTCCATTCCGGCCTCCTTGGCCAACATAGACCCACAAAGGATAGACTTCTCAAGGAACAAATTGGAAGGCGACGCCTCCATGCTTTTTGGGGGCAACAAAACAACGCAAACACTTGACGTTTCGAGGAACTTGTTGGCGTTTGATTTATCCAAAGTGGAGTTCCCCACAAGCTTGATATCGTTGGATATGAATCACAATCAGATCTCCGGGAGCATTCCCGTGGCATTGACCGCAGTGGATTTTTTGCAGGGGTTCAATGTGAGCTACAATCGGCTGTGTGGTGAGATACCGCAAGGTGGGAGATTGCAAAAGTTTGATGTGTATTCGTACTTTCACAACAAGTGCTTGTGTGGGTCCCCCCTTCCCAGCTGCCAGTAA 1074 0.5028 MQRVCFPPHSINFNALPLAVSHSPKMEAMFGLCFLTFLLFSPVAFSELCNPQDKKVLLQIKKDFNNPYLLASWNPDTDCCKWYCVKCDPKTHRINSLVILSSVPETNFSGQIPPSVGDLPYLETLEFHKLPKLTGPIQPTIAKLTKLKELYISWTNISGPVPDFLAQLINLQFLDLSFNNLSGPIPSSLSQLPHLLSLRLDWNRLTGPIPDSFGSFKKPGPSLLLSHNQLSGSIPASLANIDPQRIDFSRNKLEGDASMLFGGNKTTQTLDVSRNLLAFDLSKVEFPTSLISLDMNHNQISGSIPVALTAVDFLQGFNVSYNRLCGEIPQGGRLQKFDVYSYFHNKCLCGSPLPSCQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1434 357 Pfam Leucine rich repeat 146 205 IPR001611 GO:0005515
Ssu4g1434 357 PANTHER POLYGALACTURONASE INHIBITOR 2 34 356 - -
Ssu4g1434 357 SUPERFAMILY L domain-like 48 355 - -
Ssu4g1434 357 PANTHER POLYGALACTURONASE INHIBITOR 1 34 356 - -
Ssu4g1434 357 Gene3D Ribonuclease Inhibitor 47 357 IPR032675 -
Ssu4g1434 357 Pfam Leucine rich repeat N-terminal domain 51 88 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1434 Ssu-Chr4 23902575 23903648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1434 108 354 Receptor kinase-like Gene Family AT5G46330 29.818 1.33e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1434 - - gmx:100799184 606.29