Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1412 ATGCAGGGAGGAAAGAAAGCAGGAGAGTCCATTAAGGAAACGGCTGCGAACATTGGTGCTTCTGCCAAGTCTGGCATGGAGAAGACCAAGGCCACAGTTCAAGAGAAGGCAGAAAGGATGACAGCACGTGATCCAGTGCAAAAGGAGATGGCAACTCAAAAGAAAGAGGCAAGGATGAACCAGGCGGAGCTGGACAAGCAGGGGGCGCGTGAGCATAACGCCGCGGCGAAACAGTCGGCCACGGCGGGGCACATGGGACAGGGGCCATACACCACCGGAACTGGGACCGGAACCGCCACGTACTCCTCCACCGGGGAATATGGACAGCCCATGGGGGCCCATCAGACGTCGGCCGTGCCTGGTCATGGAACTGGGCAGCCCACGGGCCATGTCACTGAGGGAGTGGTGGGCTCACACCCCGTTGGGACTAATAGAGGCCCGGGTGGGACCGCTACGGCCCATAATACCCGTGCGGGGGGGAACCCAAATCATTATGGGTATGGGACTGGGGGTACTTATAGTTAA 525 0.5905 MQGGKKAGESIKETAANIGASAKSGMEKTKATVQEKAERMTARDPVQKEMATQKKEARMNQAELDKQGAREHNAAAKQSATAGHMGQGPYTTGTGTGTATYSSTGEYGQPMGAHQTSAVPGHGTGQPTGHVTEGVVGSHPVGTNRGPGGTATAHNTRAGGNPNHYGYGTGGTYS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1412 174 Coils Coil 59 79 - -
Ssu4g1412 174 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 46 1 174 - -
Ssu4g1412 174 MobiDBLite consensus disorder prediction 1 174 - -
Ssu4g1412 174 MobiDBLite consensus disorder prediction 84 111 - -
Ssu4g1412 174 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Ssu4g1412 174 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 1 174 IPR005513 GO:0009793
Ssu4g1412 174 MobiDBLite consensus disorder prediction 29 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1412 Ssu-Chr4 23482776 23484013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1412 - - gmx:547828 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1412 4 23482776 23484013 Ssu4g1412 4 23482776 23484013 ECH