Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1400 ATGGGATCAGTACACAAGGACCCAAATGTCTTCCACTTTAGCCATCCACATCCTTTGGAATGTACCACCGCGCCCTCCACAGGAACTGTAAGCTGCTTTGGATGCAAGCTAAAAGTTAAGTGTGGTGAGGACTATTATCAGTGCAAAACATGTGCCTTCTCTCTTCACTGTGTGTGCTACAAGATGCCCTTAGTCACAAACCACCCTTCACATCCAAGGCACGATCTAGTCCTCCTTGTTATACCTTCCACCAAAGCCACCCTCAACTGCGTGGCATGTGGGCACCATGTCACGAGCTTCTGCTACCACTGTGCTGAATGCAGCATCTTCTTTCATTCTTTGTGTCTTGCACTCCCAGTGTCCCTACCAATCACCTACCATCCCCACGAAATCAAGCTTGAGTTTTCACCACCGTATGATTTCTTCTGTGACTTGTGCAACAAACCCAGTTACAATGGGTGGCTCTACAGGTGCAGCATGTGCGAATTCGATACACATATAGCTTGTGCCGTTGAAAACTTGGAGCCCCATTTGTTTCAAAACCCAACTTTCCCTCAATCAAGCCCTTTGTTAAGGCAACTTACCAGTCACCAGGTGGAACACAAAAGGTTGAATGCTAGCGTATACAAAGGGCATGACCTTGAGATCATCAGTTTGGTGGCACAACAAATTGGTGGGGGAATCAGAGAAAATTTTGATAGTGCAGTCGCTGGATGGGACAAGAGATTATATAGTTGTCCAAGGCAAAACAATACTGGGAGTGGGAGGATGAAGATTGTCGAACTTGAATTACAAGAAAAAGAACTAAGTCCTGCTGAATTTTTGTCGAAGTTAGAAGAGAGAGCACCACTTCGGGATCAATCGACTCCACTTTCTGATCATTCGAGCACACCGTTAAGTAACCAATATAGTGACTCGTATTTTTCAATAGATTTGGCAAAGTCGTATTCAACCCATGGACGTAGTAGAAGTCAGGTACGAAGAGAAGGTGAAAGTGACCAGATAACCCGAGCTGTTATGGCAGAGAGAGTTGTAAGCAATTCCGGACGACGTGAAGAACCATTCGATATAGTTAACTGGCCATGCAATGATTCATACGATGTGGCGCAACAGAGTAAGGTGAACGCAGCGTTTTTCATCAAAGAAGGGCGAACTAGTCATTTTGGGAAATCAAGCCAGAGAGTCATGATGAAAAATCCTAACGAAAGCTTTGCCAAACAGTCCGTTAAAGATCAAACAGTTGCCAAATCAGAGTCAGAAAGATCCAGCTGTTCAGGTTGGAGGAAGTTCCTAACTTGCTGCCCTTAG 1308 0.4495 MGSVHKDPNVFHFSHPHPLECTTAPSTGTVSCFGCKLKVKCGEDYYQCKTCAFSLHCVCYKMPLVTNHPSHPRHDLVLLVIPSTKATLNCVACGHHVTSFCYHCAECSIFFHSLCLALPVSLPITYHPHEIKLEFSPPYDFFCDLCNKPSYNGWLYRCSMCEFDTHIACAVENLEPHLFQNPTFPQSSPLLRQLTSHQVEHKRLNASVYKGHDLEIISLVAQQIGGGIRENFDSAVAGWDKRLYSCPRQNNTGSGRMKIVELELQEKELSPAEFLSKLEERAPLRDQSTPLSDHSSTPLSNQYSDSYFSIDLAKSYSTHGRSRSQVRREGESDQITRAVMAERVVSNSGRREEPFDIVNWPCNDSYDVAQQSKVNAAFFIKEGRTSHFGKSSQRVMMKNPNESFAKQSVKDQTVAKSESERSSCSGWRKFLTCCP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1400 435 MobiDBLite consensus disorder prediction 288 302 - -
Ssu4g1400 435 PANTHER - 10 325 - -
Ssu4g1400 435 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 10 325 - -
Ssu4g1400 435 MobiDBLite consensus disorder prediction 280 302 - -
Ssu4g1400 435 Pfam C1 domain 126 170 IPR004146 -
Ssu4g1400 435 Pfam C1 domain 13 59 IPR004146 -
Ssu4g1400 435 Pfam C1 domain 69 115 IPR004146 -
Ssu4g1400 435 SUPERFAMILY Cysteine-rich domain 40 129 IPR046349 -
Ssu4g1400 435 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1400 - - gmx:102661734 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1400 4 23308849 23310978 Ssu4g1400 4 23308849 23310978 ECH