Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1394 ATGTCTGTCATAGGCGCGTATTCACATTTTCTCTACGGAGAGGTTTATCAGAGAGATCAACAGTACCCCCAGTACTTGGCAAGTGGGAGGGGGCATCTGTTTTCTCACAAGAGCGGTTGTGGGAACGTATGGGTTGGAAGCAGAAAGAGAGAACGAAAGATTAAACGGAGGAATTTGCGTGTGGAAGCGATGTGGCCAGATTTGTCAAGACCCAGTGAGTTAGAGATGGAGCAAATTAATGATTGTGAGCAGCTTGATCAAATTCTAGTTCATGCCCACCAGAACTCACAGCCCATCCTCATTGACTGGATGGCTGCTTGGTGCCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCCGCTGAATATCACGACAAAGTCAAATTTTATTACGTGGACGTCAATAAAGTACCTCAAACTCTAGTCAAGCGGGGCAACATCTCTAAAATGCCAACAATGCAGCTATGGAAAGATGGAGAGATGAAAGCAGAAGTCATTGGAGGCCACAAGGCCTGGCTAGTTATTGAAGAAGTCAGAGAAATGATCCAAAAGTTTGTATGA 567 0.4462 MSVIGAYSHFLYGEVYQRDQQYPQYLASGRGHLFSHKSGCGNVWVGSRKRERKIKRRNLRVEAMWPDLSRPSELEMEQINDCEQLDQILVHAHQNSQPILIDWMAAWCRKCIYLKPKLEKLAAEYHDKVKFYYVDVNKVPQTLVKRGNISKMPTMQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1394 188 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 1 188 - -
Ssu4g1394 188 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 188 IPR044253 GO:0009570
Ssu4g1394 188 CDD TRX_family 83 185 - -
Ssu4g1394 188 Pfam Thioredoxin 94 173 IPR013766 -
Ssu4g1394 188 ProSiteProfiles Thioredoxin domain profile. 59 188 IPR013766 -
Ssu4g1394 188 SUPERFAMILY Thioredoxin-like 75 185 IPR036249 -
Ssu4g1394 188 Gene3D Glutaredoxin 67 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1394 Ssu-Chr4 23167671 23170522 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1394 - - gmx:100811965 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1394 4 23167671 23170522 Ssu4g1394 4 23167671 23170522 ECH