Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1393 ATGGCCCGTTACGGCGAGGGCGACAAGCGCTGGATCGTGGAGGAGCGGGCCGACGGCACCAACGTCCACAACTGGCACTGGGCCGAGACCAACTGTCTCGAATGGTCCAGAGCCTTCTTCACCGGCCTCCTCTCCAACCTCACCGTCCTCGACGGCGAGGGCAACCTCTTCGTCAAAACGACGTCGCTCCAAACCCTCGAGGGCGAGGCCTACGTCAACGTCCGCAAGGGGAAGATCATCCCCGGCTACGAGATCAGCCTCACCCTCGCGTGGCAAGGCGAGGCCAAGGATTCTCAGGGAGCCTCCCTTCTCAAAGTCGACGGCACCGTCGAAATCCCCTACATCTCCGACGAGAACGCCGACGAGGACCCCGACCTCAAGGTCACCGTCAACGACGAAGGACCCGTCGGGAAGAGGATCAAGGACGCCATGCTCTCCAAGGGGAAACCCTTGATCTTGGAGAAGGTTAGGGTTTGGGTGCAGACCATGTCCGAAGGCGGTCCTGTTAAGGACGAATTAGACACAAAAAAACCGTCGCCGTCTCCGTCGCCGCATCCGCCGGCGGAGGCGACTGCGACGGCTGCGCCGAAGAAGGAGAGCTCCGCGGGGAAGaaggaggaaaagaagggaaggaaGAGTATCAGCTTGACGGAGAGGTTTAATTGCAGGGCGAGGGATTTGTATGAGATATTGATGGACGAGAATAGGTGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAGTAAAGAGGTTGGTGGAGAGTTTAGCATCTTTGACGGCTCGGTGACTGGGACTAATCTGGAGTTGCAGGAAGCTAAGTTGATTGTGCAGAGGTGGAGGTTTGGAAGCTGGAACGATGGGGTTCAGTCCACGGTGAGGCTTGTGTTCGAGGAGCCTGATGCGGGTGTTACCGTTGTTAAGCTGACGCATACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCCACGGTGGTGGAGAACACGGAAAGGGGATGGCGGGATCTCATTTTCCAGAGGATACGTGcggtttttggttttggaaTTTGA 1047 0.554 MARYGEGDKRWIVEERADGTNVHNWHWAETNCLEWSRAFFTGLLSNLTVLDGEGNLFVKTTSLQTLEGEAYVNVRKGKIIPGYEISLTLAWQGEAKDSQGASLLKVDGTVEIPYISDENADEDPDLKVTVNDEGPVGKRIKDAMLSKGKPLILEKVRVWVQTMSEGGPVKDELDTKKPSPSPSPHPPAEATATAAPKKESSAGKKEEKKGRKSISLTERFNCRARDLYEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGTNLELQEAKLIVQRWRFGSWNDGVQSTVRLVFEEPDAGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1393 348 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Ssu4g1393 348 SUPERFAMILY Bet v1-like 213 347 - -
Ssu4g1393 348 Gene3D - 211 347 IPR023393 -
Ssu4g1393 348 Pfam Activator of Hsp90 ATPase homolog 1-like protein 224 344 IPR013538 -
Ssu4g1393 348 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Ssu4g1393 348 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 348 IPR039981 GO:0001671|GO:0051879
Ssu4g1393 348 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Ssu4g1393 348 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 348 - -
Ssu4g1393 348 Gene3D - 18 174 IPR036338 -
Ssu4g1393 348 MobiDBLite consensus disorder prediction 165 213 - -
Ssu4g1393 348 CDD SRPBCC_Aha1 213 346 - -
Ssu4g1393 348 MobiDBLite consensus disorder prediction 199 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1393 Ssu-Chr4 23161354 23162572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1393 - - gmx:100812897 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1393 4 23161354 23162572 Ssu4g1393 4 23161354 23162572 ECH
Ssu4g1393 4 23161354 23162572 Ssu7g2728 7 55453762 55456408 PCT