Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1392 ATGCAACCCTGCGCCATGTCTTTCTCACGCTCCATCCCCACCAAAACGGCATTGGAGCGCGAGTCATCATCGTCTGACGTGTTTGCCTCCTTCTGTTACGGCAGCACCACCGTAATGAAGCGGGAGCAGCGCTTCAAACGAGTCGCCAAACCCAGATTGCCGGTTCAACCAACCGAACCGGTTCGGCGTTCGCTCCGAGCCAAACCGAACCCGTCACCGCAACCGGACACTTCTTCCGGAGAAAGGAAAACTCTGCCCCGCGATTTCTTTCAAATCGACGCGCTGGACCTCGCCCCCCGTTTGCTGGGGAAGTTTCTTCGCAGAGACGACGTCGTTCTTCAGATCACCGAGGTTGAAGCGTATAGACCAAACGACTCGGCTTGTCACGGTCGCTTTGGCATTACTTCAAGAACTGCCCCCGTTTTTGGAGCGGGTGGGCGTGCGTATGTTTATCTTTGCTATGGTCTCCACATGATGCTGAATGTTGTTGCCGACAAGGAAGGAGCTGGAGCTGCTGTTTTGATACGCTCTTGTGCTCCCATTAGTGGATTGGATGTCATTCAACAGCGCCGAGGTCTGAAAACTGAGAAACCTGTACTTCTTACCGGTCCTGGGAAGGTTGGTCAAGCACTGGGTCTTTCGACAGAATGGTCCAACCATCCTCTCTATACCCCTGGTGGTTTGGAACTCTTAGATGGTCCAGAGCCGGAAAGCATACTGGTAGGTCCACGTGTTGGTATCCAATATGCTTTGCCAGAGCATGTCAACGCATTGTGGAGATTTGCCATTGCAGGTACCCCTTGGATTAGTGCTCCAAAAAACACTCTCAGGCCAGCCTTATAG 843 0.5302 MQPCAMSFSRSIPTKTALERESSSSDVFASFCYGSTTVMKREQRFKRVAKPRLPVQPTEPVRRSLRAKPNPSPQPDTSSGERKTLPRDFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRPNDSACHGRFGITSRTAPVFGAGGRAYVYLCYGLHMMLNVVADKEGAGAAVLIRSCAPISGLDVIQQRRGLKTEKPVLLTGPGKVGQALGLSTEWSNHPLYTPGGLELLDGPEPESILVGPRVGIQYALPEHVNALWRFAIAGTPWISAPKNTLRPAL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1392 280 Gene3D - 80 277 IPR036995 GO:0003677|GO:0003905|GO:0006284
Ssu4g1392 280 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 65 277 IPR003180 GO:0003677|GO:0003905|GO:0006284
Ssu4g1392 280 CDD AAG 89 270 IPR003180 GO:0003677|GO:0003905|GO:0006284
Ssu4g1392 280 Pfam Methylpurine-DNA glycosylase (MPG) 89 266 IPR003180 GO:0003677|GO:0003905|GO:0006284
Ssu4g1392 280 Hamap Putative 3-methyladenine DNA glycosylase. 87 270 IPR003180 GO:0003677|GO:0003905|GO:0006284
Ssu4g1392 280 SUPERFAMILY FMT C-terminal domain-like 83 274 IPR011034 GO:0003824
Ssu4g1392 280 TIGRFAM 3mg: DNA-3-methyladenine glycosylase 85 270 IPR003180 GO:0003677|GO:0003905|GO:0006284
Ssu4g1392 280 MobiDBLite consensus disorder prediction 44 83 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1392 K03652 - gmx:100813424 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1392 4 23154441 23157014 Ssu4g1392 4 23154441 23157014 ECH