Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1381 ATGTGCCAAGCTCACGAAAGTTGTTCACGTTATTATAGCAGCATTACCACCTCCACCATCTCCATGGCCAAATCCAAAAACCTCACATCTATTTTCACCGTCATTCTCAATCTCACACTCCTCTTCTCATTTGCCACCGCAAAATCCCCTCGTTTCTACCGAGGCATATCTCCAACATCTCTGGCTCTCCAGAAGGAGAAGCTCAGCCACCTTCACTTCTACTTCCACGACATTGTCAGCGGCCCAAAGCCCACCGCGGTCAGAGTGGCCGAGGCCCACGTGACCAACACTTCTTCCACGCTTTTCGGACTCATAGTGATGGCCGACGACCCGTTGACCGCGGGCCCCGAACCTGGATCCAGACTCGTGGGAAAGGCCCAAGGAATTTACGGATCTGCGGCCCAGGACGAGACAGGGCTGTTGATGGTCATGAACTTCGCGTTCACGGAAGGGAAATATAATGGCAGCACACTCAGCTTGTTGGGGCGGAACACGGTGTTTTCCGCCGTGAGGGAAATGCCAATCGTTGGAGGAAGCGGGGCTTTCCGGTTCGCACGTGGGTACGCTCAGGCCAAGACTCACACATTTGATATCAAGACAGGGGATGCTGTTGTGGAGTACAACGTCTACGTGTTCCATTATTAA 645 0.5302 MCQAHESCSRYYSSITTSTISMAKSKNLTSIFTVILNLTLLFSFATAKSPRFYRGISPTSLALQKEKLSHLHFYFHDIVSGPKPTAVRVAEAHVTNTSSTLFGLIVMADDPLTAGPEPGSRLVGKAQGIYGSAAQDETGLLMVMNFAFTEGKYNGSTLSLLGRNTVFSAVREMPIVGGSGAFRFARGYAQAKTHTFDIKTGDAVVEYNVYVFHY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1381 214 PANTHER NUCLEOPORIN-RELATED 29 213 IPR004265 -
Ssu4g1381 214 Pfam Dirigent-like protein 69 212 IPR004265 -
Ssu4g1381 214 PANTHER DIRIGENT PROTEIN 29 213 - -
Ssu4g1381 214 Gene3D - 57 210 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1381 Ssu-Chr4 22913997 22914754 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1381 - - gmx:100816095 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1381 4 22913997 22914754 Ssu4g1381 4 22913997 22914754 ECH