Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1380 ATGAGCGGCCCAAAGCCCACCGCGGTCAGGATCGCTGAGGCCCAGATGATCAACACCTCCTCCTCGGATTTCGGACGACGACCCATTGACGTGGGCCCCGATTCTGGCTCCAAACTCGTGGGAAAGGCCCAAGGAATTTGCGGATCTGAGGCCCAGGATGAGTTTGGGCTCGTGATGATCTTTAACTTCGCGTTCACGGAAGGGAAATACAATGGCAGTACTCTGAGCTTGCTGAGGCGGAACAGGATATTCTCCGCCGTGAGGGAAATGCCAATTGTTGGCGGGAGCGGGGCTTTCCGGTTTGCACGTGGCTATGCTCAGGCCAGGACtcacactaataataacaagacAAGGGATGATGCTGTTGTGGAGTACAACGTTTGCGTGTTCCATTATTAG 399 0.5263 MSGPKPTAVRIAEAQMINTSSSDFGRRPIDVGPDSGSKLVGKAQGICGSEAQDEFGLVMIFNFAFTEGKYNGSTLSLLRRNRIFSAVREMPIVGGSGAFRFARGYAQARTHTNNNKTRDDAVVEYNVCVFHY 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1380 132 Gene3D - 2 123 IPR044859 -
Ssu4g1380 132 PANTHER DIRIGENT PROTEIN 17-RELATED 2 131 - -
Ssu4g1380 132 Pfam Dirigent-like protein 2 129 IPR004265 -
Ssu4g1380 132 PANTHER NUCLEOPORIN-RELATED 2 131 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1380 Ssu-Chr4 22909627 22910025 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1380 - - gmx:100816095 186.808