Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1378 ATGGCCAATTCTGAAACTCCCCTATCCGCTTTCTTCACTCCCTTAATCCTTACCTTCCTTTTCTCCTCCCTCGTCACTGCcaattattaccaaaatatctcTCCAACATATCTAGGTTTCCGTGAAGAGAAGCTCACCCATATTCACTTCTACTTCCATGAAGTTGTTACAAGCCCAAAGCCCTCCCTCGTCGTAGCCACCGAGCCCCTCAAGGGTAAGTCCAATTCTCCCCTGCCATTTGGAACCGTAGTGGTGCTCGAGGACCCATTAACAATTGGGCCCGAGCTTGACTCCAAACTGGTGGGAAAGGCCCAAGGGTTTTACATATCTGTGGCCCAAAAGGAGGGCTTGGAGTTGGAGTTAGTCATGGGGATGACCTTGGCATTCATAGAAGGGGAATATAATGGTAGCACCCTCAGTGTGTTAGGGAGAAACACCATCTTCTCTGAAGTGAGGGAGATGCCTATTATTGGTGGGACAGGTGCTTTCCGCTTTGCACGTGGGTTTGTTCAAGCTAGGAGTGTTTGGGTTGATTACGAAAAAGGAGATGCAACTGTGGAATACAACGTGTATGTGTTCCATTATTCATCTAGCTCTTCGTCTCGGGAGGAATTTAATGAGGGAATCCAATTCATGACTGACCCTAtacttaacaaaatataa 663 0.454 MANSETPLSAFFTPLILTFLFSSLVTANYYQNISPTYLGFREEKLTHIHFYFHEVVTSPKPSLVVATEPLKGKSNSPLPFGTVVVLEDPLTIGPELDSKLVGKAQGFYISVAQKEGLELELVMGMTLAFIEGEYNGSTLSVLGRNTIFSEVREMPIIGGTGAFRFARGFVQARSVWVDYEKGDATVEYNVYVFHYSSSSSSREEFNEGIQFMTDPILNKI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1378 220 Pfam Dirigent-like protein 46 193 IPR004265 -
Ssu4g1378 220 PANTHER NUCLEOPORIN-RELATED 2 203 IPR004265 -
Ssu4g1378 220 Gene3D - 38 191 IPR044859 -
Ssu4g1378 220 PANTHER DIRIGENT PROTEIN 2 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1378 Ssu-Chr4 22775380 22836287 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1378 - - gmx:100790549 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1378 4 22775380 22836287 Ssu4g1378 4 22775380 22836287 ECH