Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1377 ATGGCTAATTTTGAAACTTTCTTCATTCCCCTAATCCTTACCTTCCTTTTTTCATCCCTTGTCACCGCCAATTACTATCAAAATATATCTCCACCATATCTACTTTCTCGTGAGAAGCTCACACACATTCGCTTCTACTTCCACGAAATAATTACGAGCCCAAACCCCTCCCTCATCATAATCGACCCCCCCAAGGTTATGTCCAACTCTCCCCTTCCATTTGGATCCCTAGTGGTGCTTGAGAACCCATTGACAATTGGGCCTGAACTTGACACCAAACAGGTAGGAAAGGCCCAAGGATTTTACCTATCTGCAACCAAAAGGGAAGGTGTGGAGTTAGAGATAGTCATGGGGATGACCTTGGCCTTCATGGAAGGGGAATTTAATAGTAGCACTCTTAGTGTGTTAGGGAGAAACACCATAATCTCTGAAGTGAGGGAGATGCCAATTATTGGTGGGACAGGTGTTTTCCGCTTCGCACGTGGCTTTGTTCAAGCTAGGAGTGTCCAGGTTGATTACATAAAAGGAGATGCTACCGTGGAATACAATGTGTATGTGTTTCATTATTCATCCAGCTCTCCATCTAAGGAGGGTTTTAACGAGAAAGTCCAGTTCATGACTGATCCTAtacttaacaaaatataa 645 0.4295 MANFETFFIPLILTFLFSSLVTANYYQNISPPYLLSREKLTHIRFYFHEIITSPNPSLIIIDPPKVMSNSPLPFGSLVVLENPLTIGPELDTKQVGKAQGFYLSATKREGVELEIVMGMTLAFMEGEFNSSTLSVLGRNTIISEVREMPIIGGTGVFRFARGFVQARSVQVDYIKGDATVEYNVYVFHYSSSSPSKEGFNEKVQFMTDPILNKI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1377 214 PANTHER DIRIGENT PROTEIN 7 197 - -
Ssu4g1377 214 PANTHER NUCLEOPORIN-RELATED 7 197 IPR004265 -
Ssu4g1377 214 Gene3D - 33 186 IPR044859 -
Ssu4g1377 214 Pfam Dirigent-like protein 41 187 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1377 Ssu-Chr4 22751297 22751941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1377 - - gmx:100500048 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1377 4 22751297 22751941 Ssu4g1377 4 22751297 22751941 ECH