Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1353 ATGGTGCAGAGTCTGCGTTTGATGGCTTCTCATGGTTACCCTCCTGGCCTTGTCTTACAACCACAACTGGGCTTGGCCGGCACCAATATGAAGGGCTACCAAACATCCTTTCCTTCTCCAGTAGCAAAAGCAGACCTGATCAGATATCAGTCTCCTTGTCCTAAGCCAAGTCCATGTGAGGAGTCAAGGAAATCCCAAAATGAATGGTTTGATTATAACAAGTTTGTCGGTGTTGACTTCTCAGTTCAAAGGCCCATGCTTATTGATGACCAAGCAAACTGCTCAAATGCAGTACTTTTGGGCTTTGGCATTGTTGAACAATGCACTAagcatgataaaattttaaatttcctaatgTCCGAGACTGCTGAAGCAGGGATAGATGGAGCAAATTTATCTTTGTTATCGGACTTGATGAAATTGCAGTTGTCAGGCATTGATGAACCTCAACAACCATTGTCATCTCTTATCTACCCAACTAGCAAATTCAACATCCAGAAGCCTTTGCTTTATCTTTTTCAAGATTCAGCCCTTTCTTCAAAGATCACAGTTCATCCAGGTGGTCAAATCACATTTATGGGTACTGCGATTGAGTTGAAAGATCTTTTCTCTGTAGTTGCCGAGTCATACTTATCAAAATGCTCACATAAGGGTGAAAAGCTATCTATGCTTGTTCCACACTTCAGTAGGGTGAATATCAATGAATTAGAGAGAAGTCATTCCTCCACATTGAAGATTCAATCTACCTTAACTGCTCCTTTAAGGAGTCCTGAGAAAGTCAAACTCAAGCCAACAccaaaaaagaacaagaaagtAGGCAGGGAGAGGGATCTCTACAAGAACTATTCACATGCATGTGAGACCCTTCTGTCCCTGATGGTTGACAAGAAGCAACGTCGGAAAATGGCAATTCTCTCGCTGAAGAAATCCGGCCCTGAGCTTCCTGAGCTCCTCACACAATTTTCTGCTGGCATTGCTGGTACCGGCCTTGCAGTCCTGCTATCTGTAATTTGTAACCTAGCTTGTGGAAGGGCTACCTTTTGTGCTTCTAGCTTGTTCAACACCGGGTTTGGATTTGGGTTGGTTTGGCTTTCTGGGGCAGTAAATAAGCTAAGGGCCACAATCGTCAGCATCAGCAAGAATGCAGGAAAGTTGGGTTTGAAAGAAGAGGAAATGATGCAGAAGCTGGATAAAAGCATAAGAGATATTTACTATACTGCTGCAGCATTGCTAGCAGGGGTAGTGCTAAGGCTTGCTTGA 1260 0.4222 MVQSLRLMASHGYPPGLVLQPQLGLAGTNMKGYQTSFPSPVAKADLIRYQSPCPKPSPCEESRKSQNEWFDYNKFVGVDFSVQRPMLIDDQANCSNAVLLGFGIVEQCTKHDKILNFLMSETAEAGIDGANLSLLSDLMKLQLSGIDEPQQPLSSLIYPTSKFNIQKPLLYLFQDSALSSKITVHPGGQITFMGTAIELKDLFSVVAESYLSKCSHKGEKLSMLVPHFSRVNINELERSHSSTLKIQSTLTAPLRSPEKVKLKPTPKKNKKVGRERDLYKNYSHACETLLSLMVDKKQRRKMAILSLKKSGPELPELLTQFSAGIAGTGLAVLLSVICNLACGRATFCASSLFNTGFGFGLVWLSGAVNKLRATIVSISKNAGKLGLKEEEMMQKLDKSIRDIYYTAAALLAGVVLRLA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1353 419 PANTHER OS05G0143300 PROTEIN 2 419 - -
Ssu4g1353 419 PANTHER PROTEIN, PUTATIVE-RELATED 2 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1353 Ssu-Chr4 22370326 22375977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1353 - - gmx:100777424 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1353 4 22370326 22375977 Ssu4g1353 4 22370326 22375977 ECH
Ssu4g1353 4 22370326 22375977 Ssu7g2076 7 41084379 41084932 PCT