Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1345 ATGGCGACTGTTGGGGATATTTGCGTTTCGGCAGCCATCAATCTGTTGTCTGCGTTGGCGTTCCTGTTGGCATTTGCAATATTGCGACTTCAGCCCTTTAACGATCGGGTCTACTTCCCAAAATGGTATATGAAGGGGATAAGAGGCAGCCCAACAGGTTCCACATTGGTAAAGAAATTTGTTAACTTGGACTTTGGGACCTACATCAGGTTTCTCAACTGGATGCCTGCAGCATTGCATATGCCAGAACCTGAGCTTATTGATCACGCAGGGCTTGACTCAGCCGTGTATATTCGGATTTATATTCTCGGGGTCAAAATATTTGCCCCAATTACCATACTTGCTTTTATGGTTTTGGTTCCTGTTAACTGGACCGGGAAAACATTGGAAACACCGGGAGCTAAGAATTTGACTTTTAACGATATCGACAAGATTTCAATATCAAACGTTCCATTTGGATCAAATAGGTTTTGGGCGCATATTGTAATGTCATATGTCTTCTCAACGTGGACATGCTATAGTCTTTATAAGGAATACCAGCATGTAGCAGCTATGAGATTGCGATTTTTGGCAGCTGAACGTCGTCGTCCGGACCAATTTACTGTCCTGGTGAGGAATGTTCCCCCAGATCCCGATGAATCAGTCAGTGAGCACATCGAACATTTTTTTTGCGTCAACCATCCTGATCACTATCTGATGCATCAGGTTGTTTATAATGCCAACAAGCTTGCATCAATAGCTgcagagaagaagaaattaataaacTGGTATGTTTACTACCAAAACAAATACGAAAGAAATCCTTCCAAGAGGCCAACTACTCGGACAGGTTTCCTGGGTTTCTTGGGCGCTAAAGTTGATGCTATTGATCATTATACTgcaataattgataatttgagCAAACAAGAAgcggaagaaagagaaaatgttaTAAAGAATCCGAATGCTGTTATTCCTGCAGCTTTTGTTTCATTCAAAACACGATGGGGGGCGGCTGTCTGTGCTCAAACTCAACAAAGTAGTAATCCTACTATTTGGCTGACAGAATGGGCTCCTGAGCCTCGGGATGTCTTTTGGGAAAATCTTGCGATTCCATATTTTGACCTCAATATGCGAAGATTGCTCATGAccgtttctttatttttcctaacttttttctttatgatACCAATAGCATTGGTCCAATCTCTGGCCAACATTGAGGCAATTGAGAAGGTCCTTCCTTTCTTGAAGCCAATAATTGAAAAGCCATCTATCAAGTCTGTCATTCAAGGCTTTCTGCCAGGGCTAGCATTAAAGATATTTCTTACAATACTTCCAAAAATTCTGATGACGATGTCCAAATTGGAAGGTTTTACTTCGCTTTCAGCTTTGGATCGGAGGTCAGCTTCCAAATATTACTTGTTTGTTCTCGTCAATGTGTTCCTTGGGAGTGTTATAACAGGAACAGCATTTCAGCAACTTCAGCAGTTTATTAACCAGCCCTCTACAGAGTTCACAAAAACTGTTGGCAGTACAATCCCCATGAAAGCCACATTCTTCATCACATACATAATGGTCGATGGTTGGGCTGGAATAGCCGCAGAGATCCTCAGGTTATCTCCGTTAATTTCGTTCCACCTGAAAAACACATTCTTGGTGAAGACGGAGCAAGACAGACAGAATGCTATGGATCCTGGTAGCTTGGAATTTGCTACATCTGAACCTCGCATCCAGTTATATTTCATGCTGGGGCATGTGTATGCTCCAGTCACACCTTTTCTTCTCCCCTTCATTGTAATCTTCTTTGCTTTTTCCTACATGATCTTTCGCCACCAGATTATCAACGTGTATAACCAGCAATACGAGAGTGGAGCATCGTTTTGGCCAGATATTCATGGTCGAGTAATTATGGGCTTGATTATATCTCAAATTCTTCTGATGGGATTGTTAAGTACAAGAGGTACAGATAAGTCAACGCTAGTGCTTATTGCACAACCCGTCTTGACATTCTGGTTCCACAGATATTGCAAAGGACGCTTCGAATCTGCATTCGTAAAATTACCACTAGAGGATGCCATGGTGAAGGATACACTTGAACGGGCCGTTGAACCAAACTTAAACCTGAGACTTTATCTTCAGAATGCTTACGTACACCCAGTTTTTAAGGGCGATGATTTTGAAAAACCGGCAATCATTGATGATGAAGAGGACAATCCGCTTATTCAGACAACGAGAACTTCTCGTAGGGGTAGCAAGCCAGAATCTGATAGTGAACCTGGCAGTTGTTAA 2271 0.406 MATVGDICVSAAINLLSALAFLLAFAILRLQPFNDRVYFPKWYMKGIRGSPTGSTLVKKFVNLDFGTYIRFLNWMPAALHMPEPELIDHAGLDSAVYIRIYILGVKIFAPITILAFMVLVPVNWTGKTLETPGAKNLTFNDIDKISISNVPFGSNRFWAHIVMSYVFSTWTCYSLYKEYQHVAAMRLRFLAAERRRPDQFTVLVRNVPPDPDESVSEHIEHFFCVNHPDHYLMHQVVYNANKLASIAAEKKKLINWYVYYQNKYERNPSKRPTTRTGFLGFLGAKVDAIDHYTAIIDNLSKQEAEERENVIKNPNAVIPAAFVSFKTRWGAAVCAQTQQSSNPTIWLTEWAPEPRDVFWENLAIPYFDLNMRRLLMTVSLFFLTFFFMIPIALVQSLANIEAIEKVLPFLKPIIEKPSIKSVIQGFLPGLALKIFLTILPKILMTMSKLEGFTSLSALDRRSASKYYLFVLVNVFLGSVITGTAFQQLQQFINQPSTEFTKTVGSTIPMKATFFITYIMVDGWAGIAAEILRLSPLISFHLKNTFLVKTEQDRQNAMDPGSLEFATSEPRIQLYFMLGHVYAPVTPFLLPFIVIFFAFSYMIFRHQIINVYNQQYESGASFWPDIHGRVIMGLIISQILLMGLLSTRGTDKSTLVLIAQPVLTFWFHRYCKGRFESAFVKLPLEDAMVKDTLERAVEPNLNLRLYLQNAYVHPVFKGDDFEKPAIIDDEEDNPLIQTTRTSRRGSKPESDSEPGSC 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1345 756 Pfam Late exocytosis, associated with Golgi transport 7 178 IPR032880 -
Ssu4g1345 756 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 744 IPR045122 GO:0005227
Ssu4g1345 756 Pfam Cytosolic domain of 10TM putative phosphate transporter 199 361 IPR027815 -
Ssu4g1345 756 Pfam Calcium-dependent channel, 7TM region, putative phosphate 372 644 IPR003864 GO:0016020
Ssu4g1345 756 MobiDBLite consensus disorder prediction 725 756 - -
Ssu4g1345 756 PANTHER OS05G0393800 PROTEIN 3 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1345 Ssu-Chr4 22280106 22287908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1345 K21989 - gmx:100776693 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1345 4 22280106 22287908 Ssu4g1345 4 22280106 22287908 ECH