Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1327 ATGCAGGTACTCTGTCATGTTGTCCCTTCTCTAGTAAAGCTACGGAAAGAAGGTCTGGATGGGTACGAGAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAGTTATAGGGTCAAGCATGTAATGATGACAACTGTTTTGTTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACAATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTGGGAATACTTACGGGATATATGGAGACACTATACAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTGAGTTGGTGGCCGTATGTGCTTGCAGTATTGGGTATCTTCACCACCGTCACTATGTGGGCAGTTGTAGTAACTGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGGGAGCAATCACCTGTTACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCTGCGGGGATGCAACCTGTTCTTACCACCTCATACCTCTTGGCATTTCCAAGCATTCTTGCAAGTCTGCTGAGGTCACCTTTTTGGGAGCATATGAAGGAAATATTGAACCCTGAAACTTCTGTTGGTGCTGAGCCATGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTGttcaatatatttgatattGCGAACATGCCAAAGGAAATTgctgattatttaaataagatggGTGCGAGAATACCAAACATAAAGCCTGGGAAGGCTACTATTGAGTATCTATCAAAGGTTCAGGCATCCACACGATTTTGGGGGGGCCTATTGTTAAGTGTTTTGGCCACTACATCAAGTGTTCTTGACCACTATTTACGGCGTATCAATGCTGGATTTGCTATTGGTTTTACATCAGTTCTAATTATTGTCGGTTCCATTATTGAACTTAGAAGATCGTATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCTTTGAGACGATATGGTGTATAA 1062 0.3927 MQVLCHVVPSLVKLRKEGLDGYEKIKSYIWWMSFGFAILEALIVACYSLPYSIYAASYRVKHVMMTTVLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPVTEVEPYIPFNINPAGMQPVLTTSYLLAFPSILASLLRSPFWEHMKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1327 353 Pfam SecY 1 331 IPR002208 GO:0015031|GO:0016020
Ssu4g1327 353 Gene3D SecY subunit domain 1 343 IPR023201 -
Ssu4g1327 353 PRINTS Preprotein translocase SecY subunit signature 86 109 - -
Ssu4g1327 353 PRINTS Preprotein translocase SecY subunit signature 229 251 - -
Ssu4g1327 353 PRINTS Preprotein translocase SecY subunit signature 25 48 - -
Ssu4g1327 353 PRINTS Preprotein translocase SecY subunit signature 317 335 - -
Ssu4g1327 353 PRINTS Preprotein translocase SecY subunit signature 60 85 - -
Ssu4g1327 353 PRINTS Preprotein translocase SecY subunit signature 184 203 - -
Ssu4g1327 353 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 1 352 - -
Ssu4g1327 353 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 352 IPR002208 GO:0015031|GO:0016020
Ssu4g1327 353 SUPERFAMILY Preprotein translocase SecY subunit 1 338 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1327 1 353 Miscellaneous Gene Families AT2G31530 83.569 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1327 - - gmx:100803256 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1327 4 21924769 21931238 Ssu4g1327 4 21924769 21931238 ECH