Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1325 ATGGCTTCTGTTCATGATGATGGTGAAGTTGGTTTCGAAGAAGGAATGCTCTGGTTACCCTCTCATGTTCTGGACGAGGCATGTGACTCCAAGGTACATATGAGGAACCGCCGCCAAAAACACCAGCAGCAAGGCTACCACAGATTGCCACGGGAACCACAGTCACAGTGTTCAAAATTTACTGCAAGATCATCATATCAAAAGCCCAAACATGCCACAGGTGGGCCTGGAATGCAAGCTGTTTTCCTAGTTTCGGGACAAGGATCATGTGGTACTGGCGTGTTCTTACCCCAAAAAGCAGGCACAAAATCAACCAGGAAGCCAGCGTGTGCTCCTGTCCTTCTTCCAGCCCGAGTTGTTCAAGCTCTAAATCTTAAAGTGCACCAATTGGGCCTGCAGATTTCACCTTCTCGAGCTCCCAAATATAGCCCAAGACGCGAAGAAGCATACACTAGTGAgtcaacaaaaaaggaaaatgatcaGAAAGATGCTCTCAAGCAATGCTGTGTTATTTCTCAGAGTCAAAGCTCTTCTCCTGAGTTGTTTCTTCCAAAGGAATGGACGTACTAG 570 0.4544 MASVHDDGEVGFEEGMLWLPSHVLDEACDSKVHMRNRRQKHQQQGYHRLPREPQSQCSKFTARSSYQKPKHATGGPGMQAVFLVSGQGSCGTGVFLPQKAGTKSTRKPACAPVLLPARVVQALNLKVHQLGLQISPSRAPKYSPRREEAYTSESTKKENDQKDALKQCCVISQSQSSSPELFLPKEWTY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1325 189 MobiDBLite consensus disorder prediction 34 56 - -
Ssu4g1325 189 MobiDBLite consensus disorder prediction 141 162 - -
Ssu4g1325 189 MobiDBLite consensus disorder prediction 136 162 - -
Ssu4g1325 189 PANTHER OS01G0850000 PROTEIN 41 189 - -
Ssu4g1325 189 PANTHER TIP41-LIKE PROTEIN 41 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1325 Ssu-Chr4 21904291 21907824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1325 - - gmx:100781513 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1325 4 21904291 21907824 Ssu7g2099 7 41479229 41481598 PCT