Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1321 ATGGCAACCTCGTTGGAGACACCTTCTTCTCCTCTCCACCTCAACCACAACCAGGAGGGCGCACGCGTTATGGGTTCTTCTCCTCTGTTCAGCCCATCCTCTGATAAACGTTTCTGGAGCACTCTCAGGAGCAGGATCGACACGCTTCTTGATGCTCCTCAACCCAAAGTCCCAACTCACTCCCCTACGaaTGTACAAGGCAACAACCGGTTGAAGGAAGATTCTATGTTACTGATGAGAGGGTTTGACTCAGTTTCCCACACACTGTCTCTGTTGTCTAATAATTTGGACAATGCCCTACAGGGTGCTAGAGAATTGGCGAATCCACCCACGTTAACTGACATATTCCACAGCAAAAATGATAAGGTTGAAAACAAAGAGGATTCGGGAGAGAAACAGAAAGAGGAGTCAAAGCAAGGAATGAAAAGGAAACTTGATCATAATGATTTCTCTGAAGTAAATGCCGTTGACTCGCAAAACGAGAATGGGAAAAAAGTGATGGATAGGAACATCAAGAAAGCAAAAAATCTTGCAGTTTCAATGGCAACCAGAGCAGCTTCACTAGCAAGAGAATTGAAGTCCATTAAATCAGATCTATGTTTTATGTTAGAAAGGTGTGGTTTGCTTGAAGAGGAGAACAGGAGACTGCGTGATGGATTTGCAAAAGGAGTTAGACCCGAAGAAGATGATCTGGTGAGGCTTCAGCTGGAAGCACTTCTTGCTGAGAAGTCCAGACTGGCCAATGAAAATGCAAATCTCGTTAGAGAAAATCAATGCCTTCATCAGCTTGTGGAGTACCACCAACTTGCCTCTCAAGATCTCTCTGAGTCATATGAGGATGCTATCCAGGGAGTGTACTTGGACTTCTCACCTCCGCCGCCAACAATTGCTGAAGAGACAAGGGATGaagatggtgatgatgatgaaaataGAGAGCCACACACACCCAGGAACGATATCTATAAGTTTTCTGATTCACTTGATGATGGAGAAGAGTAA 999 0.4384 MATSLETPSSPLHLNHNQEGARVMGSSPLFSPSSDKRFWSTLRSRIDTLLDAPQPKVPTHSPTNVQGNNRLKEDSMLLMRGFDSVSHTLSLLSNNLDNALQGARELANPPTLTDIFHSKNDKVENKEDSGEKQKEESKQGMKRKLDHNDFSEVNAVDSQNENGKKVMDRNIKKAKNLAVSMATRAASLARELKSIKSDLCFMLERCGLLEEENRRLRDGFAKGVRPEEDDLVRLQLEALLAEKSRLANENANLVRENQCLHQLVEYHQLASQDLSESYEDAIQGVYLDFSPPPPTIAEETRDEDGDDDENREPHTPRNDIYKFSDSLDDGEE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1321 332 Coils Coil 236 256 - -
Ssu4g1321 332 PANTHER OSJNBA0065B15.1 PROTEIN 1 324 - -
Ssu4g1321 332 MobiDBLite consensus disorder prediction 110 148 - -
Ssu4g1321 332 MobiDBLite consensus disorder prediction 285 332 - -
Ssu4g1321 332 PANTHER UNCHARACTERIZED 1 324 - -
Ssu4g1321 332 MobiDBLite consensus disorder prediction 307 332 - -
Ssu4g1321 332 MobiDBLite consensus disorder prediction 117 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1321 Ssu-Chr4 21795574 21797312 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1321 - - gmx:100783134 524.242