Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1320 ATGGGGAGTCTTGCGCTTGAAACTGAGGATGTAAGCTCAGATATATACCTTTCACTGGGGCTTAAGGAATCAGATAAAGGAGTAGGAATTCCTCGGGTTTTATCTCTTCTCTCTTCACTTCTCGAGAGATCAGTTCAGAGAAATGAAACGCTATTGGAGGCAAAGCACATAAAAGATGTTGTTACAGTATTTCACGGTTTAAGAGCTCCTACTCTGAGTGTTCGTAAGTACATTGATCGTATCTTCAAGTACTCAGGTTGCAGCCCATCCTGCTTTGTTGTGGCACACATATATGTGGATAGATTTATTCAGCACACAGAAATCAAATTGACTTCACTTAATGTGCACCGGCTTCTGATAACAAGCATTATGCTAGCAGCAAAGTTTATGGATGATGCGTTCTACAACAATGCTTACTATGCAAAAGTTGGGGGAGTAAGCACATCTGAATTAAACAGGTTGGAGATGAGCTTTCTGTTTGGCGTAGATTTTAGACTTCAGGTTAGTGTAGACACGTTTGGAAGATATTGTAGGCAATTGGAGAAGGAAGCCGCAGAAGCAGTCCAAATTGAAAGGCCAATGCAGGCTTGTCGAATTAAAGAAAGCTGGTCAAACAAAGATGATCCTACTTGTGCTTCCACAATTGCAAGATGA 654 0.4113 MGSLALETEDVSSDIYLSLGLKESDKGVGIPRVLSLLSSLLERSVQRNETLLEAKHIKDVVTVFHGLRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTEIKLTSLNVHRLLITSIMLAAKFMDDAFYNNAYYAKVGGVSTSELNRLEMSFLFGVDFRLQVSVDTFGRYCRQLEKEAAEAVQIERPMQACRIKESWSNKDDPTCASTIAR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1320 217 CDD CYCLIN 76 159 IPR013763 -
Ssu4g1320 217 Pfam Cyclin 58 166 IPR013922 GO:0000079|GO:0019901
Ssu4g1320 217 PANTHER CYCLIN 12 204 - -
Ssu4g1320 217 Gene3D - 23 214 - -
Ssu4g1320 217 PANTHER UNCHARACTERIZED 12 204 IPR013922 GO:0000079|GO:0019901
Ssu4g1320 217 SUPERFAMILY Cyclin-like 77 166 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1320 Ssu-Chr4 21768955 21770129 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1320 - - gmx:100805926 411.379