Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1303 ATGGAGACACTCGTTGTCGTGGCGCAGCATAGGAACCAATACTACAGCAGGTCGAAGCCCCGAGGGCACGCCGCGTTTGGTTCTTCTTCACCCTCCGAGACTTTAGGGGCATCAATTGCAGGACTTTCCAAACGGGCCTCCTCAGAAACACCGTCATTAACTCCTTCAAATTGCAGAACCACTCCCAGTAGCGCCCCGGTTCCCATCAACCACAAAAAGCAGAGAGGTTTCAGTGAAAGTGTTCCTGATGGGAGCATTTTGCTCTCTGAACTTTGGGCCGGGCCTACTTACTCGAATTCTCCACCGCCTAGTTCGTTGCCTATTCCAAAATTTTCTGTGAGACCGAAGAGGAGTGTGTCCCTTGATCTCCCTGGTTCCTGTGCTGAAGTTGAAATGCAGTTACATGCTAGCTCTGCCCCATCCTCCCCTCCTAGGGAGCGTTCCCCTTCTGCCAGAGACCTCTTTGATTCTGCGACGAAGAATCTGTGTCGCATCCTCAATCTTAACTTGGATGATGAATGA 522 0.5134 METLVVVAQHRNQYYSRSKPRGHAAFGSSSPSETLGASIAGLSKRASSETPSLTPSNCRTTPSSAPVPINHKKQRGFSESVPDGSILLSELWAGPTYSNSPPPSSLPIPKFSVRPKRSVSLDLPGSCAEVEMQLHASSAPSSPPRERSPSARDLFDSATKNLCRILNLNLDDE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1303 173 PANTHER BNAA03G57290D PROTEIN 1 173 - -
Ssu4g1303 173 Pfam Proline-rich nuclear receptor coactivator motif 92 111 - -
Ssu4g1303 173 MobiDBLite consensus disorder prediction 134 154 - -
Ssu4g1303 173 MobiDBLite consensus disorder prediction 23 68 - -
Ssu4g1303 173 MobiDBLite consensus disorder prediction 16 81 - -
Ssu4g1303 173 PANTHER - 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1303 Ssu-Chr4 21305164 21305756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1303 - - gmx:102663401 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1303 4 21305164 21305756 Ssu4g1303 4 21305164 21305756 ECH
Ssu4g1303 4 21305164 21305756 Ssu7g2123 7 41894762 41895349 PCT